RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 BCAT1P54687 386 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 EEFSECP57772 596 aaKnown RBP6.54□□□□□ -1.36
RTF1-204ENST00000558117 CCNIQ14094 377 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 KCNAB1Q14722 419 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 COL28A1Q2UY09 1125 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 ZNF528Q3MIS6 628 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 CERCAMQ5T4B2 595 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 PLAG1Q6DJT9 500 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 RNF44Q7L0R7 432 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 TLK2Q86UE8 772 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 CAND1Q86VP6 1230 aaKnown RBP6.54□□□□□ -1.36
RTF1-204ENST00000558117 VGLL2Q8N8G2 317 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 ATP11CQ8NB49 1132 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 VN1R2Q8NFZ6 395 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 AFAP1L1Q8TED9 768 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 TBC1D5Q92609 795 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 DPCDQ9BVM2 203 aaPredicted RBP6.54□□□□□ -1.36
RTF1-204ENST00000558117 CHST12Q9NRB3 414 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 RELNP78509 3460 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 GPR75-ASB3A0A0A6YYF3 556 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 H0YIZ8 118 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 CD3EAPO15446 510 aaKnown RBP6.53□□□□□ -1.36
RTF1-204ENST00000558117 CREB3O43889 395 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 GH2P01242 217 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 NPSP0C0P6 89 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 HGFP14210 728 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 ENGP17813 658 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 DNAJB1P25685 340 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 UQCRC1P31930 480 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 STT3AP46977 705 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 STK3Q13188 491 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 BIRC2Q13490 618 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 CCDC142Q17RM4 750 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 AARS2Q5JTZ9 985 aaKnown RBP6.53□□□□□ -1.36
RTF1-204ENST00000558117 MYOCDQ8IZQ8 938 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 SDR16C5Q8N3Y7 309 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 CCDC33Q8N5R6 958 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 FANCBQ8NB91 859 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 ZBTB44Q8NCP5 570 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 CTAGE1Q96RT6 745 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 RPS6KC1Q96S38 1066 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 YME1L1Q96TA2 773 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 DUSP22Q9NRW4 184 aa6.53□□□□□ -1.36
RTF1-204ENST00000558117 AGPSO00116 658 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 LRP3O75074 770 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 PDE8BO95263 885 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 KCNK5O95279 499 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 TOP3BO95985 862 aaKnown RBP6.52□□□□□ -1.37
RTF1-204ENST00000558117 DCNP07585 359 aaKnown RBP6.52□□□□□ -1.37
RTF1-204ENST00000558117 DLDP09622 509 aaKnown RBP6.52□□□□□ -1.37
RTF1-204ENST00000558117 FGFR2P21802 821 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 PRKAR1BP31321 381 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 ALDH5A1P51649 535 aaPredicted RBP6.52□□□□□ -1.37
RTF1-204ENST00000558117 RIPK4P57078 832 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 C21orf58P58505 322 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 LONRF1Q17RB8 773 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 PCID2Q5JVF3 399 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 FCRLBQ6BAA4 426 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 DPY19L3Q6ZPD9 716 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 Q6ZWC4 215 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 LRRC8DQ7L1W4 858 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 PARS2Q7L3T8 475 aaKnown RBP6.52□□□□□ -1.37
RTF1-204ENST00000558117 RBM23Q86U06 439 aaKnown RBP6.52□□□□□ -1.37
RTF1-204ENST00000558117 RP9Q8TA86 221 aaKnown RBP6.52□□□□□ -1.37
RTF1-204ENST00000558117 IPCEF1Q8WWN9 437 aaPredicted RBP6.52□□□□□ -1.37
RTF1-204ENST00000558117 TOP1MTQ969P6 601 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 EVI5LQ96CN4 794 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 IQCDQ96DY2 449 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 SH3BP4Q9P0V3 963 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 FNIP2Q9P278 1114 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 BCCIPQ9P287 314 aaKnown RBP eCLIP6.52□□□□□ -1.37
RTF1-204ENST00000558117 GMEB2Q9UKD1 530 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 CAPN11Q9UMQ6 739 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 PHTF1Q9UMS5 762 aa6.52□□□□□ -1.37
RTF1-204ENST00000558117 DRG1Q9Y295 367 aaKnown RBP6.52□□□□□ -1.37
RTF1-204ENST00000558117 MROH7-TTC4A0A0A0MT08 1334 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 CREBBPQ92793 2442 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 SIPA1L1O43166 1804 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 MICAL3Q7RTP6 2002 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 A0A087WZ62 844 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 GLULP15104 373 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 LIMK1P53667 647 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 CYP1B1Q16678 543 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 SPECC1Q5M775 1068 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 HIBCHQ6NVY1 386 aaPredicted RBP6.51□□□□□ -1.37
RTF1-204ENST00000558117 ZNF788Q6ZQV5 615 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 ARMCX2Q7L311 632 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 FOXP4Q8IVH2 680 aaPredicted RBP6.51□□□□□ -1.37
RTF1-204ENST00000558117 HASPINQ8TF76 798 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 LRRC46Q96FV0 321 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 UBA5Q9GZZ9 404 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 CDH22Q9UJ99 828 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 DNHD1Q96M86 4753 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 NBPF19A0A087WUL8 3843 aa6.51□□□□□ -1.37
RTF1-204ENST00000558117 AQP7P3A6NL99 342 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 J3QKU1 62 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 AP4M1O00189 453 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 PSMD9O00233 223 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 ZNF213O14771 459 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms