RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SMG7Q92540 1137 aaKnown RBP20.77■□□□□ 0.92
SNRPA1-205ENST00000558036 XPO6Q96QU8 1125 aaKnown RBP20.77■□□□□ 0.92
SNRPA1-205ENST00000558036 ATP13A1Q9HD20 1204 aa20.77■□□□□ 0.92
SNRPA1-205ENST00000558036 SYBUQ9NX95 663 aa20.77■□□□□ 0.92
SNRPA1-205ENST00000558036 DPP7Q9UHL4 492 aa20.77■□□□□ 0.92
SNRPA1-205ENST00000558036 TCRBV9S1A1TA0A576 114 aa20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 ILVBLA1L0T0 632 aa20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 CBX4O00257 560 aa20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 RGS16O15492 202 aaPredicted RBP20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 PMPCBO75439 489 aa20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 GCAP28676 217 aa20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 MZF1P28698 734 aaPredicted RBP20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 HPDP32754 393 aaPredicted RBP20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 LBRQ14739 615 aaKnown RBP20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 TTC39BQ5VTQ0 682 aaPredicted RBP20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 SETD3Q86TU7 594 aaPredicted RBP20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 NSMCE1Q8WV22 266 aa20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 EBNA1BP2Q99848 306 aaKnown RBP20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 TDP1Q9NUW8 608 aa20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 MRPS23Q9Y3D9 190 aaKnown RBP20.77■□□□□ 0.91
SNRPA1-205ENST00000558036 NOTCH4Q99466 2003 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 HMGB1P1B2RPK0 211 aaPredicted RBP20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 MUSKO15146 869 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 AGTP01019 485 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 MLNP12872 115 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 PHBP35232 272 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 MAGOHP61326 146 aaKnown RBP20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 DSC2Q02487 901 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 IHHQ14623 411 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 UNC5AQ6ZN44 842 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 TEX26Q8N6G2 289 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 FATE1Q969F0 183 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 CCDC77Q9BR77 488 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 ROPN1BQ9BZX4 212 aaPredicted RBP20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 ROPN1Q9HAT0 212 aaPredicted RBP20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 CLEC4EQ9ULY5 219 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 ATG2AQ2TAZ0 1938 aa20.76■□□□□ 0.91
SNRPA1-205ENST00000558036 TYW5A2RUC4 315 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 SDR42E2A6NKP2 422 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 LUC7L3O95232 432 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 TPH1P17752 444 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 OXCT1P55809 520 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 NIPAL4Q0D2K0 466 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 CBLBQ13191 982 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 CDH18Q13634 790 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 PCSK7Q16549 785 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 PRPF39Q86UA1 669 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 CYP4X1Q8N118 509 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 PGM2Q96G03 612 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 RETREG1Q9H6L5 497 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 LRRC40Q9H9A6 602 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 AAR2Q9Y312 384 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 ERI2A8K979 691 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 SNAP91O60641 907 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 PFKLP17858 780 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 DDX6P26196 483 aaKnown RBP eCLIP20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 CD86P42081 329 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 SMAD1Q15797 465 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 CERCAMQ5T4B2 595 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 TMCO4Q5TGY1 634 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 LINGO4Q6UY18 593 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 LEMD2Q8NC56 503 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 LRRC39Q96DD0 335 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 STAMBPL1Q96FJ0 436 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 CASS4Q9NQ75 786 aa20.75■□□□□ 0.91
SNRPA1-205ENST00000558036 KDELR3O43731 214 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 TCEA3O75764 348 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 ANXA9O76027 345 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 AGBL2Q5U5Z8 902 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 CES3Q6UWW8 571 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 ARID3BQ8IVW6 561 aaPredicted RBP20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 MFN1Q8IWA4 741 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 UNC5BQ8IZJ1 945 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 FAM76AQ8TAV0 307 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 FICDQ9BVA6 458 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 ACE2Q9BYF1 805 aaPredicted RBP20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 SLC25A51Q9H1U9 297 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 ACSS3Q9H6R3 686 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 ZNF510Q9Y2H8 683 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 IVLP07476 585 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 CSKP41240 450 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 IFNAR2P48551 515 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 ATP1A2P50993 1020 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 KCNC3Q14003 757 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 ZNF235Q14590 738 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 KBTBD12Q3ZCT8 623 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 TRMT10BQ6PF06 316 aaKnown RBP20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 ST13P5Q8NFI4 369 aaPredicted RBP20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 IMP4Q96G21 291 aaKnown RBP20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 TBL1YQ9BQ87 522 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 FEM1AQ9BSK4 669 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 LMAN2LQ9H0V9 348 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 VPS28Q9UK41 221 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 ADAM21Q9UKJ8 722 aa20.74■□□□□ 0.91
SNRPA1-205ENST00000558036 E2F8A0AVK6 867 aa20.73■□□□□ 0.91
SNRPA1-205ENST00000558036 ATP9BO43861 1147 aa20.73■□□□□ 0.91
SNRPA1-205ENST00000558036 MMP2P08253 660 aa20.73■□□□□ 0.91
SNRPA1-205ENST00000558036 ELMSAN1Q6PJG2 1045 aa20.73■□□□□ 0.91
SNRPA1-205ENST00000558036 KLHDC8BQ8IXV7 354 aa20.73■□□□□ 0.91
SNRPA1-205ENST00000558036 CPXM2Q8N436 756 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms