RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 IPO9Q96P70 1041 aaKnown RBP6.05□□□□□ -1.44
VPS33B-207ENST00000557470 DNAI2Q9GZS0 605 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 ZSCAN16Q9H4T2 348 aaPredicted RBP6.05□□□□□ -1.44
VPS33B-207ENST00000557470 MMRN2Q9H8L6 949 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 ERVMER34-1Q9H9K5 563 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 CISHQ9NSE2 258 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 EXOC1Q9NV70 894 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 NDFIP2Q9NV92 336 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 FRMD4BQ9Y2L6 1034 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 ITIH6Q6UXX5 1313 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3DA0A087WVF3 549 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3IA0A087WXS9 549 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3EA0A087X179 549 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3KA0A087X1G2 549 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 EDDM13A0A1B0GTR0 161 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3FA6NER0 549 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 SHISA8B8ZZ34 492 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 B8ZZF3 427 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3LB9A6J9 549 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 CDK2AP1O14519 115 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 XPO1O14980 1071 aaKnown RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 MAPK13O15264 365 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 PDPK1O15530 556 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 ARHGAP6O43182 974 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 IRAK2O43187 625 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 ACSL4O60488 711 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 CPNE3O75131 537 aaKnown RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 RTN2O75298 545 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 IGLV3-27P01718 113 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 ASLP04424 464 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3HP0C7X1 549 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 VAV1P15498 845 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 GOT1P17174 413 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 MAT2AP31153 395 aaKnown RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 DRD3P35462 400 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 UCNP55089 124 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 SLC8A3P57103 927 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 RPS24P62847 133 aaKnown RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 SFSWAPQ12872 951 aaKnown RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 PWP1Q13610 501 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 CDH18Q13634 790 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 LBRQ14739 615 aaKnown RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 FSCBQ5H9T9 825 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 PITRM1Q5JRX3 1037 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TTC39BQ5VTQ0 682 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 BROXQ5VW32 411 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 CDCP2Q5VXM1 449 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3GQ6DHY5 549 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3CQ6IPX1 549 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 MSANTD2Q6P1R3 559 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 INTS8Q75QN2 995 aaKnown RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D3Q8IZP1 549 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 CNPY4Q8N129 248 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 STK40Q8N2I9 435 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 SLC25A45Q8N413 288 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 CARNMT1Q8N4J0 409 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 MFSD2AQ8NA29 543 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 KDM1BQ8NB78 822 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 HJURPQ8NCD3 748 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 CCDC150Q8NCX0 1101 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 FIBINQ8TAL6 211 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 CHAC2Q8WUX2 184 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 KCNE4Q8WWG9 221 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 RPL10LQ96L21 214 aaKnown RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 ZNF578Q96N58 590 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 ZNF700Q9H0M5 742 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 LRRC4Q9HBW1 653 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TMEM8AQ9HCN3 771 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 UCKL1Q9NWZ5 548 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 ARHGAP20Q9P2F6 1191 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 SLCO3A1Q9UIG8 710 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TSPAN16Q9UKR8 245 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 ATXN7L1Q9ULK2 861 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 TPX2Q9ULW0 747 aaKnown RBP6.04□□□□□ -1.44
VPS33B-207ENST00000557470 ERVW-1Q9UQF0 538 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 PLAAQ9Y263 795 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 CA5BQ9Y2D0 317 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 FLNCQ14315 2725 aa6.04□□□□□ -1.44
VPS33B-207ENST00000557470 LY6G6EA0A0G2JKS1 128 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 A0A1B0GVM2 712 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 TARSL2A2RTX5 802 aaKnown RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 FFAR2O15552 330 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 KLK10O43240 276 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 CALUO43852 315 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 SLC28A2O43868 658 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 OPA1O60313 960 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 USP12O75317 370 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 CSO75390 466 aaKnown RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 YEATS4O95619 227 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 IL1BP01584 269 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 SRPRAP08240 638 aaKnown RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 MYF5P13349 255 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 KRT13P13646 458 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 LCP1P13796 627 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 C5AR1P21730 350 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 DGKAP23743 735 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 NR2F2P24468 414 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 MAN1A1P33908 653 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 MAP2K3P46734 347 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms