RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 RASSF3Q86WH2 238 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 GPR65Q8IYL9 337 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 GPR152Q8TDT2 470 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 TOP1MTQ969P6 601 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 AZIN2Q96A70 460 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 ZNF669Q96BR6 464 aaPredicted RBP8.72□□□□□ -1.01
NEMF-215ENST00000557380 ZNF689Q96CS4 500 aaPredicted RBP8.72□□□□□ -1.01
NEMF-215ENST00000557380 VWCEQ96DN2 955 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 ZNF419Q96HQ0 510 aaPredicted RBP8.72□□□□□ -1.01
NEMF-215ENST00000557380 MYRFLQ96LU7 910 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 FAM111AQ96PZ2 611 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 PPP1R12CQ9BZL4 782 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 SLC25A51Q9H1U9 297 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 RXFP1Q9HBX9 757 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 ARNT2Q9HBZ2 717 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 SLCO1B3Q9NPD5 702 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 VPS45Q9NRW7 570 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 RBM22Q9NW64 420 aaKnown RBP eCLIP8.72□□□□□ -1.012e-8■■■■■ 35.1
NEMF-215ENST00000557380 SIRPGQ9P1W8 387 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 TXNDC16Q9P2K2 825 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 DCDC2Q9UHG0 476 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 MAFFQ9ULX9 164 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 USH1CQ9Y6N9 552 aa8.72□□□□□ -1.01
NEMF-215ENST00000557380 EFCAB14O75071 495 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 GLRA3O75311 464 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 USP12O75317 370 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 DNAJC8O75937 253 aaPredicted RBP8.71□□□□□ -1.01
NEMF-215ENST00000557380 HLA-DQB2P05538 268 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 ERVK-10P10266 1014 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 OR1D2P34982 312 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 SPRP35270 261 aaPredicted RBP8.71□□□□□ -1.01
NEMF-215ENST00000557380 ATP5C1P36542 298 aaKnown RBP8.71□□□□□ -1.01
NEMF-215ENST00000557380 PBX3P40426 434 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 SCTRP47872 440 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 PPP3CCP48454 512 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 LIMK2P53671 638 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 DSG1Q02413 1049 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 IL10RBQ08334 325 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 OLIG2Q13516 323 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 BMPR2Q13873 1038 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 CERCAMQ5T4B2 595 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 TEDDM1Q5T9Z0 273 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 FYB2Q5VWT5 728 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 PDPK2PQ6A1A2 396 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 DENND5AQ6IQ26 1287 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 PKN3Q6P5Z2 889 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 RANBP10Q6VN20 620 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 DEFB128Q7Z7B8 93 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 C10orf67Q8IYJ2 551 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 UNC5BQ8IZJ1 945 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 NDUFAF2Q8N183 169 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 CCDC63Q8NA47 563 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 ZNF784Q8NCA9 323 aaPredicted RBP8.71□□□□□ -1.01
NEMF-215ENST00000557380 ZNF461Q8TAF7 563 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 USP33Q8TEY7 942 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 ATP2A3Q93084 1043 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 IGSF8Q969P0 613 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 TRMT2BQ96GJ1 504 aaKnown RBP8.71□□□□□ -1.01
NEMF-215ENST00000557380 RBBP8Q99708 897 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 CLSTN3Q9BQT9 956 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 MCMBPQ9BTE3 642 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 BEGAINQ9BUH8 593 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 HERC2P3Q9BVR0 1158 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 VN1R3Q9BXE9 311 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 RASSF4Q9H2L5 321 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 RC3H2Q9HBD1 1191 aaKnown RBP8.71□□□□□ -1.01
NEMF-215ENST00000557380 ATP13A1Q9HD20 1204 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 ABCF3Q9NUQ8 709 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 PIH1D1Q9NWS0 290 aaKnown RBP8.71□□□□□ -1.01
NEMF-215ENST00000557380 DNMT3LQ9UJW3 386 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 CHD5Q8TDI0 1954 aa8.71□□□□□ -1.01
NEMF-215ENST00000557380 ZNF840PA6NDX5 716 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 C2CD2LO14523 706 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 ADAM12O43184 909 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 TIMM44O43615 452 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 ATP9BO43861 1147 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 SIN3BO75182 1162 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 DCTN3O75935 186 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 CNTN5O94779 1100 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 ALDOAP04075 364 aaKnown RBP8.71□□□□□ -1.02
NEMF-215ENST00000557380 TROVE2P10155 538 aaKnown RBP eCLIP8.71□□□□□ -1.028e-16■■■■■ 36.3
NEMF-215ENST00000557380 HMGA1P17096 107 aaKnown RBP8.71□□□□□ -1.02
NEMF-215ENST00000557380 TACR2P21452 398 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 ALDH3A1P30838 453 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 SKIV2L2P42285 1042 aaKnown RBP8.71□□□□□ -1.02
NEMF-215ENST00000557380 POLD2P49005 469 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 LIG3P49916 1009 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 SERPINB8P50452 374 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 HTRA3P83110 453 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 CDK18Q07002 472 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 BNIP1Q12981 228 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 BTG3Q14201 252 aaPredicted RBP8.71□□□□□ -1.02
NEMF-215ENST00000557380 ALFQ53S48 1182 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 MARC1Q5VT66 337 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 ATG16L1Q676U5 607 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 RAP1GAP2Q684P5 730 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 KIAA1841Q6NSI8 718 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 KDELC1Q6UW63 502 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 MIB1Q86YT6 1006 aa8.71□□□□□ -1.02
NEMF-215ENST00000557380 CNTN4Q8IWV2 1026 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms