RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ZDHHC23Q8IYP9 409 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 TMEM163Q8TC26 289 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 FAM216AQ8WUB2 273 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 HDAC7Q8WUI4 952 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 TMED6Q8WW62 240 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 GFM1Q96RP9 751 aaKnown RBP4.5□□□□□ -1.69
VRK1-207ENST00000557352 C1QTNF4Q9BXJ3 329 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 ABHD16BQ9H3Z7 469 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 ELAC1Q9H777 363 aaKnown RBP4.5□□□□□ -1.69
VRK1-207ENST00000557352 PRDM8Q9NQV8 689 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 C19orf53Q9UNZ5 99 aaPredicted RBP4.5□□□□□ -1.69
VRK1-207ENST00000557352 OSGIN2Q9Y236 505 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 ATAD2BQ9ULI0 1458 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 C17orf102A2RUQ5 167 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 DENND3A2RUS2 1198 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 SRRM3A6NNA2 597 aaPredicted RBP4.49□□□□□ -1.69
VRK1-207ENST00000557352 RNMTO43148 476 aaKnown RBP4.49□□□□□ -1.69
VRK1-207ENST00000557352 DDNO94850 711 aaPredicted RBP4.49□□□□□ -1.69
VRK1-207ENST00000557352 DDAH2O95865 285 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 CLCNKBP51801 687 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 AP2B1P63010 937 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 HLFQ16534 295 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 H1FNTQ75WM6 255 aaPredicted RBP4.49□□□□□ -1.69
VRK1-207ENST00000557352 SERPINA11Q86U17 422 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 ZNF329Q86UD4 541 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 TRIM74Q86UV6 250 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 TRIM73Q86UV7 250 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 NEXN-AS1Q8NBZ9 246 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 CPT1BQ92523 772 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 ELAC2Q9BQ52 826 aaKnown RBP4.49□□□□□ -1.69
VRK1-207ENST00000557352 IFT27Q9BW83 186 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 CADM1Q9BY67 442 aaKnown RBP4.49□□□□□ -1.69
VRK1-207ENST00000557352 PABPC3Q9H361 631 aaKnown RBP4.49□□□□□ -1.69
VRK1-207ENST00000557352 CHST12Q9NRB3 414 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 SEL1LQ9UBV2 794 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 KCNG2Q9UJ96 466 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 BAG5Q9UL15 447 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 SRPRBQ9Y5M8 271 aaKnown RBP4.49□□□□□ -1.69
VRK1-207ENST00000557352 NCAPD3P42695 1498 aa4.49□□□□□ -1.69
VRK1-207ENST00000557352 A0A087WV62 115 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 HNRNPRO43390 633 aaKnown RBP4.48□□□□□ -1.69
VRK1-207ENST00000557352 PRC1O43663 620 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 KCNJ13O60928 360 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 CLDN7O95471 211 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 SERPINA4P29622 427 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 BNC1Q01954 994 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 GALNT1Q10472 559 aaPredicted RBP4.48□□□□□ -1.69
VRK1-207ENST00000557352 KRTAP27-1Q3LI81 207 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 FAM76BQ5HYJ3 339 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 TMEM268Q5VZI3 342 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 ATG9BQ674R7 924 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 DGAT2L7PQ6IED9 249 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 PGBD2Q6P3X8 592 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 KLHL17Q6TDP4 642 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 MON1BQ7L1V2 547 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 WDR5BQ86VZ2 330 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 PALB2Q86YC2 1186 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 TEX45Q8NA69 505 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 MIGA1Q8NAN2 632 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 FIZ1Q96SL8 496 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 CLPBQ9H078 707 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 DDX31Q9H8H2 851 aaKnown RBP4.48□□□□□ -1.69
VRK1-207ENST00000557352 KLQ9UEF7 1012 aa4.48□□□□□ -1.69
VRK1-207ENST00000557352 PLSCR5A0PG75 271 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 DDTLA6NHG4 134 aaPredicted RBP4.47□□□□□ -1.69
VRK1-207ENST00000557352 SYT5O00445 386 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 SLC16A5O15375 505 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 GRID2O43424 1007 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 CHN1P15882 459 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 PDIA3P30101 505 aaKnown RBP4.47□□□□□ -1.69
VRK1-207ENST00000557352 AVPR2P30518 371 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 RFC1P35251 1148 aaPredicted RBP4.47□□□□□ -1.69
VRK1-207ENST00000557352 SERPINF1P36955 418 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 GRSF1Q12849 480 aaKnown RBP eCLIP4.47□□□□□ -1.69
VRK1-207ENST00000557352 KIF19Q2TAC6 998 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 LRRC24Q50LG9 513 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 HSP90AB2PQ58FF8 381 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 LIN54Q6MZP7 749 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 AADACL2Q6P093 401 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 GSG1LQ6UXU4 331 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 RINLQ6ZS11 566 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 GALNT7Q86SF2 657 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 CCDC117Q8IWD4 279 aaPredicted RBP4.47□□□□□ -1.69
VRK1-207ENST00000557352 TCP11L2Q8N4U5 519 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 PTGR2Q8N8N7 351 aaPredicted RBP4.47□□□□□ -1.69
VRK1-207ENST00000557352 C3orf49Q96BT1 292 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 IL25Q9H293 177 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 ACAD9Q9H845 621 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 OCIAD1Q9NX40 245 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 NDUFAF4Q9P032 175 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 UPB1Q9UBR1 384 aa4.47□□□□□ -1.69
VRK1-207ENST00000557352 CC2D2AQ9P2K1 1620 aa4.46□□□□□ -1.69
VRK1-207ENST00000557352 BAZ1BQ9UIG0 1483 aaKnown RBP4.46□□□□□ -1.7
VRK1-207ENST00000557352 IGLV5-52A0A0A0MRZ9 124 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 IGHV4-28A0A0C4DH34 117 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 LINC01553A4QN01 128 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 EYA2O00167 538 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 SYN3O14994 580 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 ITM2AO43736 263 aa4.46□□□□□ -1.7
VRK1-207ENST00000557352 CCNT1O60563 726 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms