RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CAPNS1P04632 268 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 GLDCP23378 1020 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 STAT1P42224 750 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 GNA12Q03113 381 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 STAT4Q14765 748 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 NEK5Q6P3R8 708 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 DRC7Q8IY82 874 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 GPT2Q8TD30 523 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 ARRDC3Q96B67 414 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 CNDP2Q96KP4 475 aaKnown RBP14.48□□□□□ -0.09
SNX6-210ENST00000557341 SPON2Q9BUD6 331 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 CEP44Q9C0F1 390 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 TNKS2Q9H2K2 1166 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 FANCLQ9NW38 375 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 SIK3Q9Y2K2 1263 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 APC2O95996 2303 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 LGALS16A8MUM7 142 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 LDOC1O95751 146 aaPredicted RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 CHRNB2P17787 502 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 ETFBP38117 255 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 PTPN9P43378 593 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 NSFP46459 744 aaKnown RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 RXRGP48443 463 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 GSCP56915 257 aaPredicted RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 ARF5P84085 180 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 MYL5Q02045 173 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 NRG1Q02297 640 aaPredicted RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 SYCP1Q15431 976 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 SMAD1Q15797 465 aaKnown RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 C15orf59Q2T9L4 293 aaPredicted RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 ARTNQ5T4W7 220 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 SASS6Q6UVJ0 657 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 DHRS13Q6UX07 377 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 ERN2Q76MJ5 926 aaKnown RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 STRADAQ7RTN6 431 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 SPATS2Q86XZ4 545 aaKnown RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 EID2Q8N6I1 236 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 PCDH20Q8N6Y1 951 aaKnown RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 CHST14Q8NCH0 376 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 NEK11Q8NG66 645 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 SLC30A5Q8TAD4 765 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 RXFP2Q8WXD0 754 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 PCMTD1Q96MG8 357 aaPredicted RBP14.47□□□□□ -0.09
SNX6-210ENST00000557341 ANO10Q9NW15 660 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 OR12D3Q9UGF7 316 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 PCDHGA1Q9Y5H4 931 aa14.47□□□□□ -0.09
SNX6-210ENST00000557341 A0A1W2PQU0 124 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 C2CD4BA6NLJ0 364 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 GOLGA6L22H0YM25 854 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 LEFTY1O75610 366 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 RFPL3O75679 317 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 ZMPSTE24O75844 475 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 UNGP13051 313 aaPredicted RBP14.46□□□□□ -0.09
SNX6-210ENST00000557341 PRLRP16471 622 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 MAPKAPK2P49137 400 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 NEK3P51956 506 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 COPB1P53618 953 aaKnown RBP14.46□□□□□ -0.09
SNX6-210ENST00000557341 SLC20A2Q08357 652 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 STX1AQ16623 288 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 CCDC14Q49A88 953 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 ARSIQ5FYB1 569 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 MANEALQ5VSG8 457 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 SFMBT2Q5VUG0 894 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 RWDD4Q6NW29 188 aaKnown RBP14.46□□□□□ -0.09
SNX6-210ENST00000557341 DPY19L3Q6ZPD9 716 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 HORMAD1Q86X24 394 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 TMEM145Q8NBT3 493 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 JOSD2Q8TAC2 188 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 MDM1Q8TC05 714 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 KLHDC7BQ96G42 594 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 MYOCQ99972 504 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 SELENOOQ9BVL4 669 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 HDAC8Q9BY41 377 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 RETREG1Q9H6L5 497 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 LIMA1Q9UHB6 759 aaKnown RBP14.46□□□□□ -0.09
SNX6-210ENST00000557341 RALYQ9UKM9 306 aaKnown RBP14.46□□□□□ -0.09
SNX6-210ENST00000557341 WASF2Q9Y6W5 498 aa14.46□□□□□ -0.09
SNX6-210ENST00000557341 CXorf51AA0A1B0GTR3 108 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 LOC400499M0QZD8 3231 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 TAF4O00268 1085 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 SLC31A1O15431 190 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 PCDH8O95206 1070 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 CALB1P05937 261 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 CDK4P11802 303 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 KRT3P12035 628 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 RHOQP17081 205 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 HNRNPA2B1P22626 353 aaKnown RBP14.45□□□□□ -0.1
SNX6-210ENST00000557341 ITGB7P26010 798 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 AKT2P31751 481 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 ADRA1BP35368 520 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 HNF1BP35680 557 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 ACADVLP49748 655 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 CCNHP51946 323 aaPredicted RBP14.45□□□□□ -0.1
SNX6-210ENST00000557341 GEMIN4P57678 1058 aaKnown RBP14.45□□□□□ -0.1
SNX6-210ENST00000557341 PTP4A2Q12974 167 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 BNIP3Q12983 259 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 ZNF284Q2VY69 593 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 RAB6CQ53S08 254 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 PHLDB2Q86SQ0 1253 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 C3orf20Q8ND61 904 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms