RNA–Protein interactions for RNA: ENST00000557181.5

APEX1-217, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-217ENST00000557181 COPS2P61201 443 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 SNRPD1P62314 119 aaKnown RBP12.97□□□□□ -0.33
APEX1-217ENST00000557181 IL10RBQ08334 325 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 ZNF235Q14590 738 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 RFTN1Q14699 578 aaPredicted RBP12.97□□□□□ -0.33
APEX1-217ENST00000557181 PAFAH1B3Q15102 231 aaKnown RBP12.97□□□□□ -0.33
APEX1-217ENST00000557181 LLGL1Q15334 1064 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 RPS6KA1Q15418 735 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 FAM46CQ5VWP2 391 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 AFMIDQ63HM1 303 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 WDR5BQ86VZ2 330 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 TMPRSS6Q8IU80 811 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 LRRC49Q8IUZ0 686 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 ARHGAP12Q8IWW6 846 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 MAML2Q8IZL2 1156 aaPredicted RBP12.97□□□□□ -0.33
APEX1-217ENST00000557181 STK40Q8N2I9 435 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 MDGA1Q8NFP4 955 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 MYO19Q96H55 970 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 GDAP1L1Q96MZ0 367 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 TM6SF2Q9BZW4 377 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 TNKS2Q9H2K2 1166 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 MTG2Q9H4K7 406 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 DYRK4Q9NR20 520 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 TRMT1Q9NXH9 659 aaKnown RBP12.97□□□□□ -0.33
APEX1-217ENST00000557181 EBF1Q9UH73 591 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 RAB23Q9ULC3 237 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 PACSIN2Q9UNF0 486 aaPredicted RBP12.97□□□□□ -0.33
APEX1-217ENST00000557181 NCKAP1Q9Y2A7 1128 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 CACNA1IQ9P0X4 2223 aa12.97□□□□□ -0.33
APEX1-217ENST00000557181 CKAP5Q14008 2032 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 NUP205Q92621 2012 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 C3orf70A6NLC5 250 aaPredicted RBP12.96□□□□□ -0.33
APEX1-217ENST00000557181 J3KR12 359 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 ALOX15BO15296 676 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 SMAD6O43541 496 aaKnown RBP12.96□□□□□ -0.33
APEX1-217ENST00000557181 CST8O60676 142 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 RPP40O75818 363 aaKnown RBP12.96□□□□□ -0.33
APEX1-217ENST00000557181 MAP3K6O95382 1288 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 ADH1BP00325 375 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 PRNPP04156 253 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 KRT10P13645 584 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 VAV1P15498 845 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 TGM2P21980 687 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 CNR2P34972 360 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 GBE1Q04446 702 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 ZBTB16Q05516 673 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 DMWDQ09019 674 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 PDK1Q15118 436 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
APEX1-217ENST00000557181 CARD16Q5EG05 197 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 C9orf64Q5T6V5 341 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 TMCO4Q5TGY1 634 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 C11orf74Q86VG3 221 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 RASSF3Q86WH2 238 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 MMAAQ8IVH4 418 aaKnown RBP12.96□□□□□ -0.33
APEX1-217ENST00000557181 PQLC3Q8N755 202 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 P3H4Q92791 437 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 ISG20Q96AZ6 181 aaKnown RBP12.96□□□□□ -0.33
APEX1-217ENST00000557181 MRGPRX1Q96LB2 322 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 ZNF599Q96NL3 588 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 FERMT1Q9BQL6 677 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 HEMGNQ9BXL5 484 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 KLC2Q9H0B6 622 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 SLC6A17Q9H1V8 727 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 SEPT3Q9UH03 358 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 SCML1Q9UN30 329 aa12.96□□□□□ -0.33
APEX1-217ENST00000557181 CHD5Q8TDI0 1954 aa12.96□□□□□ -0.34
APEX1-217ENST00000557181 NYNRINQ9P2P1 1898 aaKnown RBP12.95□□□□□ -0.34
APEX1-217ENST00000557181 hCG_1818297A0A087WSY0 165 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 NDUFS2O75306 463 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 TJP3O95049 919 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 GSRP00390 522 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 OXTRP30559 389 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
APEX1-217ENST00000557181 GARSP41250 739 aaKnown RBP12.95□□□□□ -0.34
APEX1-217ENST00000557181 NR2C2P49116 596 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 RENBPP51606 427 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 CCDC15Q0P6D6 951 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 GALNT2Q10471 571 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 AP1B1Q10567 949 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 TCF15Q12870 199 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 LBRQ14739 615 aaKnown RBP12.95□□□□□ -0.34
APEX1-217ENST00000557181 CST6Q15828 149 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 CFAP58Q5T655 872 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 SLC9A4Q6AI14 798 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 ARHGAP36Q6ZRI8 547 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 PRR23BQ6ZRT6 265 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 GRIN3AQ8TCU5 1115 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 FRS2Q8WU20 508 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 PTPRN2Q92932 1015 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 TRIM44Q96DX7 344 aaPredicted RBP12.95□□□□□ -0.34
APEX1-217ENST00000557181 HES6Q96HZ4 224 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 PPP1R16AQ96I34 528 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 OMDQ99983 421 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 OSBPL8Q9BZF1 889 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 MKRN2Q9H000 416 aaKnown RBP12.95□□□□□ -0.34
APEX1-217ENST00000557181 RSPH9Q9H1X1 276 aaPredicted RBP12.95□□□□□ -0.34
APEX1-217ENST00000557181 ZDHHC6Q9H6R6 413 aa12.95□□□□□ -0.34
APEX1-217ENST00000557181 HECAQ9UBI9 543 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms