RNA–Protein interactions for RNA: ENST00000556705.5

SRP54-AS1-204, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 2 BASIC

Gene SRP54-AS1, Length 580 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-204ENST00000556705 TBC1D3FA6NER0 549 aaPredicted RBP13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 UPK3BL1B0FP48 263 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TBC1D3LB9A6J9 549 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 UPK3BL2E5RIL1 263 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 WNT9AO14904 365 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 PLRG1O43660 514 aaKnown RBP13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 GYPCP04921 128 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TBC1D3HP0C7X1 549 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CEACAM1P13688 526 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 EPHB2P29323 1055 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SERPINH1P50454 418 aaKnown RBP13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CCR5P51681 352 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 AFF3P51826 1226 aaKnown RBP13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 PPP2CBP62714 309 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 PPP2CAP67775 309 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 POLD3Q15054 466 aaPredicted RBP13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 KCNT1Q5JUK3 1230 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 AGBL4Q5VU57 503 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TBC1D3GQ6DHY5 549 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TBC1D3CQ6IPX1 549 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 LAYNQ6UX15 382 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 LEKR1Q6ZMV7 388 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 DPY19L3Q6ZPD9 716 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TBC1D3Q8IZP1 549 aaPredicted RBP13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TMIEQ8NEW7 156 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 ARRDC3Q96B67 414 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 PEBP4Q96S96 227 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 MAGEH1Q9H213 219 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 NOL6Q9H6R4 1146 aaKnown RBP13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 GAREM1Q9H706 876 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 PCSK1NQ9UHG2 260 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 LUC7L2Q9Y383 392 aaKnown RBP13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SNX11Q9Y5W9 270 aa13.51□□□□□ -0.25
SRP54-AS1-204ENST00000556705 WASH4PA8MWX3 477 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 KPNA3O00505 521 aaPredicted RBP13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 KCNK3O14649 394 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SLC7A4O43246 635 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 RAMP2O60895 175 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SERPING1P05155 500 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 DESP17661 470 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CASP14P31944 242 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 ETFBP38117 255 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 GRIA4P48058 902 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 DNA2P51530 1060 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 AIF1P55008 147 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TAS2R38P59533 333 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CA9Q16790 459 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 KIF19Q2TAC6 998 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 HLA-BQ31612 363 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CARD16Q5EG05 197 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 ARSIQ5FYB1 569 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 PCDH20Q8N6Y1 951 aaKnown RBP13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 RTL3Q8N8U3 475 aaKnown RBP13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CCDC114Q96M63 670 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SLC6A18Q96N87 628 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CEP44Q9C0F1 390 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 KLC2Q9H0B6 622 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 IL36AQ9UHA7 158 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 AP4E1Q9UPM8 1137 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 ANKRD6Q9Y2G4 727 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 BZW2Q9Y6E2 419 aaKnown RBP13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 WASF2Q9Y6W5 498 aa13.5□□□□□ -0.25
SRP54-AS1-204ENST00000556705 A0A087X0T9 212 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CXorf51AA0A1B0GTR3 108 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 LATO43561 262 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 KDELR3O43731 214 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SH3BP5O60239 455 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 LEFTY1O75610 366 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 RNF8O76064 485 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 PRNPP04156 253 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 WNT1P04628 370 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 FAM228BP0C875 321 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 MIPP30301 263 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 RECQLP46063 649 aaPredicted RBP13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 RACK1P63244 317 aaKnown RBP13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 FAM193AP78312 1265 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SLC14A1Q13336 389 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TEAD4Q15561 434 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 ERMARDQ5T6L9 678 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 PIP5KL1Q5T9C9 394 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CYP4V2Q6ZWL3 525 aaPredicted RBP13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 GRIN3AQ8TCU5 1115 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 FNIP1Q8TF40 1166 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 ISG20Q96AZ6 181 aaKnown RBP13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 IQCDQ96DY2 449 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TRIM11Q96F44 468 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CAMK1GQ96NX5 476 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 EPAS1Q99814 870 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SNRNP25Q9BV90 132 aaKnown RBP13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 TM6SF2Q9BZW4 377 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SLC32A1Q9H598 525 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 DHX35Q9H5Z1 703 aaKnown RBP13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 CATSPERBQ9H7T0 1116 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 ARHGAP20Q9P2F6 1191 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 HPCAL4Q9UM19 191 aa13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 FNDC3AQ9Y2H6 1198 aaKnown RBP13.49□□□□□ -0.25
SRP54-AS1-204ENST00000556705 SCINQ9Y6U3 715 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms