RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 FGF11Q92914 225 aa18.03■□□□□ 0.48
SDR39U1-219ENST00000556523 TNKS2Q9H2K2 1166 aa18.03■□□□□ 0.48
SDR39U1-219ENST00000556523 KIAA1468Q9P260 1216 aa18.03■□□□□ 0.48
SDR39U1-219ENST00000556523 AJAP1Q9UKB5 411 aaPredicted RBP18.03■□□□□ 0.48
SDR39U1-219ENST00000556523 SNX10Q9Y5X0 201 aa18.03■□□□□ 0.48
SDR39U1-219ENST00000556523 TDRD6O60522 2096 aaKnown RBP18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 A6NNZ2 444 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 FOXN3O00409 490 aaPredicted RBP18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 PIAS2O75928 621 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 TFE3P19532 575 aaPredicted RBP18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 CLCN1P35523 988 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 SCNN1AP37088 669 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 NEK3P51956 506 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 RAPGEF1Q13905 1077 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 MAN2A1Q16706 1144 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 ARSIQ5FYB1 569 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 RETSATQ6NUM9 610 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 TMC6Q7Z403 805 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 FAM114A1Q8IWE2 563 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 SLC25A45Q8N413 288 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 OR7D4Q8NG98 312 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 FAM174AQ8TBP5 190 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 PGAP3Q96FM1 320 aaPredicted RBP18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 FCRL3Q96P31 734 aaPredicted RBP18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 TBCBQ99426 244 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 SPON2Q9BUD6 331 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 HDAC8Q9BY41 377 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 SIX2Q9NPC8 291 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 UCKL1Q9NWZ5 548 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 MPP6Q9NZW5 540 aa18.02■□□□□ 0.48
SDR39U1-219ENST00000556523 SHROOM3Q8TF72 1996 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 A0A0D9SEW6 157 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 SMAD6O43541 496 aaKnown RBP18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 ENDOD1O94919 500 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 CLDN2P57739 230 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 TBC1D25Q3MII6 688 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 SLC25A52Q3SY17 297 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 SEL1L3Q68CR1 1132 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 GCNT7Q6ZNI0 430 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 DPY19L3Q6ZPD9 716 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 DCP2Q8IU60 420 aaKnown RBP18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 FAM71AQ8IYT1 594 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 ZNF683Q8IZ20 524 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 C18orf8Q96DM3 657 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 IFT43Q96FT9 208 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 DEPDC7Q96QD5 511 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 CEP44Q9C0F1 390 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 PRORYQ9H606 182 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 ATP13A1Q9HD20 1204 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 ANLNQ9NQW6 1124 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 DNAJC28Q9NX36 388 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 NLGN3Q9NZ94 848 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 TRPM6Q9BX84 2022 aa18.01■□□□□ 0.47
SDR39U1-219ENST00000556523 ILVBLA1L0T0 632 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 NEMP2A6NFY4 417 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 DRGXA6NNA5 263 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 LEFTY1O75610 366 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 PRKCSHP14314 528 aaPredicted RBP18■□□□□ 0.47
SDR39U1-219ENST00000556523 SERPINH1P50454 418 aaKnown RBP18■□□□□ 0.47
SDR39U1-219ENST00000556523 DUSP3P51452 185 aaPredicted RBP18■□□□□ 0.47
SDR39U1-219ENST00000556523 DNA2P51530 1060 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 HNRNPKP61978 463 aaKnown RBP eCLIP18■□□□□ 0.478e-10■□□□□ 10.3
SDR39U1-219ENST00000556523 C19orf57Q0VDD7 668 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 CCDC173Q0VFZ6 552 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 CAMK4Q16566 473 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 KIAA1161Q6NSJ0 714 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 ZNF783Q6ZMS7 281 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 ABI3BPQ7Z7G0 1075 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 ERICH1Q86X53 443 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 PCDH20Q8N6Y1 951 aaKnown RBP18■□□□□ 0.47
SDR39U1-219ENST00000556523 C1orf74Q96LT6 269 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 LGMNQ99538 433 aa18■□□□□ 0.47
SDR39U1-219ENST00000556523 ZFR2Q9UPR6 939 aaKnown RBP18■□□□□ 0.47
SDR39U1-219ENST00000556523 IGLV3-10A0A075B6K4 115 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 H3BM21 787 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 GOLGA8SH3BPF8 625 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 I6L893 689 aaPredicted RBP17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 PES1O00541 588 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 ATXN7O15265 892 aaPredicted RBP17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 SRGAP2O75044 1071 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 CKMT1AP12532 417 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 ADRB3P13945 408 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 ITGB7P26010 798 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 CDH5P33151 784 aaPredicted RBP17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 GABRB2P47870 512 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 RPS21P63220 83 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 TMEM259Q4ZIN3 620 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 TAF3Q5VWG9 929 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 KYAT3Q6YP21 454 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 Q6ZSR6 202 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 ZSCAN30Q86W11 494 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 XYLT1Q86Y38 959 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 IRF2BP1Q8IU81 584 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 MLKLQ8NB16 471 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 SLC39A7Q92504 469 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 NT5C3BQ969T7 300 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 HAPLN3Q96S86 360 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 HEPHQ9BQS7 1158 aa17.99■□□□□ 0.47
SDR39U1-219ENST00000556523 DUSP23Q9BVJ7 150 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms