RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 VOPP1Q96AW1 172 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 SIPA1Q96FS4 1042 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 HMCESQ96FZ2 354 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 CSPG4P5Q96PW8 444 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 DUSP15Q9H1R2 295 aaPredicted RBP9.86□□□□□ -0.83
SRP54-210ENST00000556380 CATSPERBQ9H7T0 1116 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 ZWILCHQ9H900 591 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 ATP13A1Q9HD20 1204 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.86□□□□□ -0.83
SRP54-210ENST00000556380 ETNK2Q9NVF9 386 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 BCCIPQ9P287 314 aaKnown RBP eCLIP9.86□□□□□ -0.83
SRP54-210ENST00000556380 SMG5Q9UPR3 1016 aaKnown RBP9.86□□□□□ -0.83
SRP54-210ENST00000556380 ACTL7AQ9Y615 435 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 CHD5Q8TDI0 1954 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 CFAP54Q96N23 3096 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 EML5Q05BV3 1969 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 IGHV1OR15-9A0A0B4J2B8 117 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 BTNL10A8MVZ5 291 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 C10orf142B7Z368 130 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 H3BRJ5 948 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 CBX4O00257 560 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 MCF2LO15068 1137 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 BUB1BO60566 1050 aaPredicted RBP9.85□□□□□ -0.83
SRP54-210ENST00000556380 ZNF217O75362 1048 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 CD48P09326 243 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 TGM1P22735 817 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 AMPD1P23109 780 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 ETFBP38117 255 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 NNMTP40261 264 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 SERPINH1P50454 418 aaKnown RBP9.85□□□□□ -0.83
SRP54-210ENST00000556380 TPMTP51580 245 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 SERINC3Q13530 473 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 PARP15Q460N3 678 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 LRRC38Q5VT99 294 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 IL31Q6EBC2 164 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 RETSATQ6NUM9 610 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 CEP68Q76N32 757 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 C11orf74Q86VG3 221 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 STK40Q8N2I9 435 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 NPWQ8N729 165 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 ACRBPQ8NEB7 543 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 OR2A12Q8NGT7 310 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 HSPH1Q92598 858 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 PRCCQ92733 491 aaPredicted RBP9.85□□□□□ -0.83
SRP54-210ENST00000556380 CEP44Q9C0F1 390 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 SLC39A8Q9C0K1 460 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 LACRTQ9GZZ8 138 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 GRPEL1Q9HAV7 217 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 DONSONQ9NYP3 566 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 WSB2Q9NYS7 404 aaPredicted RBP9.85□□□□□ -0.83
SRP54-210ENST00000556380 RCOR3Q9P2K3 495 aaPredicted RBP9.85□□□□□ -0.83
SRP54-210ENST00000556380 SLC25A13Q9UJS0 675 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 MFHAS1Q9Y4C4 1052 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 DUSP10Q9Y6W6 482 aa9.85□□□□□ -0.83
SRP54-210ENST00000556380 SPAG17Q6Q759 2223 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 C3orf70A6NLC5 250 aaPredicted RBP9.84□□□□□ -0.83
SRP54-210ENST00000556380 TMEM110-MUSTN1A8MSY1 372 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 RETP07949 1114 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 KRT7P08729 469 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 COMTP21964 271 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 SLC1A1P43005 524 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 MRE11P49959 708 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 CDH6P55285 790 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 GSDMDP57764 484 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 SKOR1P84550 965 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 BYSLQ13895 437 aaKnown RBP9.84□□□□□ -0.83
SRP54-210ENST00000556380 DPYSL3Q14195 570 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 ELAVL3Q14576 367 aaKnown RBP9.84□□□□□ -0.83
SRP54-210ENST00000556380 LPAL2Q16609 132 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 HADHQ16836 314 aaKnown RBP9.84□□□□□ -0.83
SRP54-210ENST00000556380 ACCSLQ4AC99 568 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 SPDYCQ5MJ68 293 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 PMS2CLQ68D20 193 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 ZNF776Q68DI1 518 aaPredicted RBP9.84□□□□□ -0.83
SRP54-210ENST00000556380 LAIR1Q6GTX8 287 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 KIAA1324Q6UXG2 1013 aaKnown RBP9.84□□□□□ -0.83
SRP54-210ENST00000556380 PRR23BQ6ZRT6 265 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 Q6ZVU0 165 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 MMAAQ8IVH4 418 aaKnown RBP9.84□□□□□ -0.83
SRP54-210ENST00000556380 TP53INP2Q8IXH6 220 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 LZTR1Q8N653 840 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 ATP11CQ8NB49 1132 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 PCDH19Q8TAB3 1148 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 RAPGEF5Q92565 580 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 FAM131CQ96AQ9 280 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 ISG20Q96AZ6 181 aaKnown RBP9.84□□□□□ -0.83
SRP54-210ENST00000556380 FAF2Q96CS3 445 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 CELF6Q96J87 481 aaKnown RBP9.84□□□□□ -0.83
SRP54-210ENST00000556380 LOXL4Q96JB6 756 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 PDFQ9HBH1 243 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 SARDHQ9UL12 918 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 PPM1HQ9ULR3 514 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 CYP8B1Q9UNU6 501 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 HYOU1Q9Y4L1 999 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 ALG6Q9Y672 507 aa9.84□□□□□ -0.83
SRP54-210ENST00000556380 NUP205Q92621 2012 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 KNL1Q8NG31 2342 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 A0A0U1RQJ8 604 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 ZSCAN5CA6NGD5 496 aaPredicted RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 J3KR12 359 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms