RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 GDF10P55107 478 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 SNRPD1P62314 119 aaKnown RBP9.38□□□□□ -0.91
ACTN1-218ENST00000556343 MRPS25P82663 173 aaKnown RBP9.38□□□□□ -0.91
ACTN1-218ENST00000556343 RAD51Q06609 339 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 TNK2Q07912 1038 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 NSUN2Q08J23 767 aaKnown RBP eCLIP9.38□□□□□ -0.91
ACTN1-218ENST00000556343 WASHC5Q12768 1159 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 TDGQ13569 410 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 IZUMO3Q5VZ72 239 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 WDR93Q6P2C0 686 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 ARHGAP36Q6ZRI8 547 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 KIAA0907Q7Z7F0 614 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-218ENST00000556343 LINC00523Q86TU6 105 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 HOOK3Q86VS8 718 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 TP53INP2Q8IXH6 220 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 PPIL6Q8IXY8 311 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 ZNF567Q8N184 647 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 TEX26Q8N6G2 289 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 ATP11CQ8NB49 1132 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 LRRN4CLQ8ND94 238 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 CCDC110Q8TBZ0 833 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 ISG20Q96AZ6 181 aaKnown RBP9.38□□□□□ -0.91
ACTN1-218ENST00000556343 ASIC4Q96FT7 647 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 FCRL5Q96RD9 977 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 TRIM51Q9BSJ1 452 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 CIPCQ9C0C6 399 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 CEP44Q9C0F1 390 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 SLC25A51Q9H1U9 297 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 GBA3Q9H227 469 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 GLOD4Q9HC38 313 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 NT5MQ9NPB1 228 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 HPS4Q9NQG7 708 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 GDF3Q9NR23 364 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 THEGQ9P2T0 379 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 DMGDHQ9UI17 866 aaKnown RBP9.38□□□□□ -0.91
ACTN1-218ENST00000556343 VPS51Q9UID3 782 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 ATP8A1Q9Y2Q0 1164 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 OBSL1O75147 1896 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 UQCRHLA0A096LP55 91 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 NPC1O15118 1278 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 SNAP91O60641 907 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ZMPSTE24O75844 475 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 UQCRHP07919 91 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 DLDP09622 509 aaKnown RBP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 TPSB2P20231 275 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 TNFRSF8P28908 595 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 TNFRSF4P43489 277 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 RPL21P46778 160 aaKnown RBP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 SERPINH1P50454 418 aaKnown RBP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ITGA8P53708 1063 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 PLTPP55058 493 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 RHOAP61586 193 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 SLC10A7Q0GE19 358 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 GRSF1Q12849 480 aaKnown RBP eCLIP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 MPP3Q13368 585 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 GRM3Q14832 879 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 BRD3Q15059 726 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 TPSAB1Q15661 275 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ELF2Q15723 593 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 SLC14A2Q15849 920 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ACCSLQ4AC99 568 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 CCNI2Q6ZMN8 369 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 RALGPS2Q86X27 583 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ADHFE1Q8IWW8 467 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 APCDD1Q8J025 514 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 PCDH20Q8N6Y1 951 aaKnown RBP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 KDM1BQ8NB78 822 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ST13P5Q8NFI4 369 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 WFDC5Q8TCV5 224 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 LRRN4Q8WUT4 740 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 SEC14L1Q92503 715 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ALG14Q96F25 216 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 LMLNQ96KR4 655 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 PSKH2Q96QS6 385 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 P2RY13Q9BPV8 354 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 RPP25Q9BUL9 199 aaKnown RBP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 PARD6BQ9BYG5 372 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ANKZF1Q9H8Y5 726 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 LRRC40Q9H9A6 602 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 PDFQ9HBH1 243 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ETNK1Q9HBU6 452 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 SCUBE2Q9NQ36 999 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 EIF2B3Q9NR50 452 aaKnown RBP9.37□□□□□ -0.91
ACTN1-218ENST00000556343 VPS45Q9NRW7 570 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ELOVL2Q9NXB9 296 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 GTSE1Q9NYZ3 720 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 SUN2Q9UH99 717 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 FAM153AQ9UHL3 310 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 CLEC4EQ9ULY5 219 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 SHOC2Q9UQ13 582 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 ERVW-1Q9UQF0 538 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 NEU2Q9Y3R4 380 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 CDH23Q9H251 3354 aa9.37□□□□□ -0.91
ACTN1-218ENST00000556343 C2orf16Q68DN1 1984 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 A0A1W2PQ67 120 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 LOC730098B7Z3J9 87 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 MAN2B1O00754 1011 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms