RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 GRK6P43250 576 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ACOT2P49753 483 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ZNF132P52740 706 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 SLURP1P55000 103 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 BNC1Q01954 994 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 PAK1Q13153 545 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 MAPRE1Q15691 268 aaKnown RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ANO4Q32M45 955 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 VWA3BQ502W6 1294 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 TAF1BQ53T94 588 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ZFYVE27Q5T4F4 411 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ADALQ6DHV7 355 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 GRAMD4Q6IC98 578 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 PAQR3Q6TCH7 311 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 DHRS13Q6UX07 377 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 KCNK18Q7Z418 384 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 MIB1Q86YT6 1006 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 LURAP1LQ8IV03 231 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ZCCHC9Q8N567 271 aaKnown RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 MYCT1Q8N699 235 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 NECAB1Q8N987 351 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 TERB1Q8NA31 727 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 NETO2Q8NC67 525 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 NSUN7Q8NE18 718 aaKnown RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 PLEKHO2Q8TD55 490 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 CACTINQ8WUQ7 758 aaKnown RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 SCFD1Q8WVM8 642 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 FGF11Q92914 225 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 NXPE2Q96DL1 559 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 TOE1Q96GM8 510 aaKnown RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 MRGPRX1Q96LB2 322 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 CLUHP3Q96NS8 147 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ACOX2Q99424 681 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 GABRG3Q99928 467 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 NUP58Q9BVL2 599 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 TTLL2Q9BWV7 592 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 GPR174Q9BXC1 333 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 TRIM39Q9HCM9 518 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 CD248Q9HCU0 757 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 SPHK2Q9NRA0 654 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 SMPD4Q9NXE4 827 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 GDAP2Q9NXN4 497 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 WSB2Q9NYS7 404 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 WDR35Q9P2L0 1181 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 NUDT5Q9UKK9 219 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 NOL7Q9UMY1 257 aaKnown RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 L1RE1Q9UN81 338 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 AGAP1Q9UPQ3 857 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 PCDHGA1Q9Y5H4 931 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 X6R8D5 127 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 AKAP13Q12802 2813 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 A0A1B0GVT2 93 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 PP2D1A8MPX8 630 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 LAD1O00515 517 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 GSTA4O15217 222 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 TLX3O43711 291 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 PCDHGA12O60330 932 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 CRTAMO95727 393 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 OAS1P00973 400 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 ASLP04424 464 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 MBL2P11226 248 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 BDNFP23560 247 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 FPR2P25090 351 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 HNF1BP35680 557 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 IGFALSP35858 605 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 FLT3P36888 993 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 PRPHP41219 470 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 LIMS1P48059 325 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 KCNC1P48547 511 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 GYS2P54840 703 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 SLC12A3P55017 1021 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 NOP14P78316 857 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 RBP5P82980 135 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 GTF2BQ00403 316 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 GUCY1B3Q02153 619 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 RHDQ02161 417 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 SEMG2Q02383 582 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 TAF10Q12962 218 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 STARD3Q14849 445 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 RTP5Q14D33 572 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 POSTNQ15063 836 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 ZRSR1Q15695 479 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 IL17AQ16552 155 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 ME3Q16798 604 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 KIF19Q2TAC6 998 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 CCDC157Q569K6 752 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 HYIQ5T013 277 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 DCAF12L1Q5VU92 463 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 SLC39A4Q6P5W5 647 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 KIAA1324Q6UXG2 1013 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 OSTM1Q86WC4 334 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 SKAP1Q86WV1 359 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 TMEM25Q86YD3 366 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 DCP2Q8IU60 420 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 ZC3H7AQ8IWR0 971 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 CSGALNACT2Q8N6G5 542 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 LRRC52Q8N7C0 313 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 MYCBPAPQ8TBZ2 947 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 GCN1Q92616 2671 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms