RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 POMPQ9Y244 141 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 SSX2IPQ9Y2D8 614 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 RAP2CQ9Y3L5 183 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 CCDC189A1A4V9 331 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 YJEFN3A6XGL0 299 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 NRP1O14786 923 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 BUD23O43709 281 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 CELF2O95319 508 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 USP17L7P0C7H9 530 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 GNAT1P11488 350 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 COL6A2P12110 1019 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 RAG1P15918 1043 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 SAT1P21673 171 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 DNAJB1P25685 340 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 LRPAP1P30533 357 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ARRB2P32121 409 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 GJA5P36382 358 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 SERPINB5P36952 375 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 NUDT2P50583 147 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PAPOLAP51003 745 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 KPNA2P52292 529 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 CRYBB1P53674 252 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 MTTPP55157 894 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 RPL26P61254 145 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 IRF9Q00978 393 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ZNF33AQ06730 810 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PRKAA1Q13131 559 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 SLC12A1Q13621 1099 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 HNRNPDQ14103 355 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 GRB14Q14449 540 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 USP10Q14694 798 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 PPP2R5DQ14738 602 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 LAPTM4AQ15012 233 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 SLC9B1Q4ZJI4 515 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 UBXN11Q5T124 520 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 CERCAMQ5T4B2 595 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 KCTD11Q693B1 232 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 NAPRTQ6XQN6 538 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 HFE2Q6ZVN8 426 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PAQR9Q6ZVX9 377 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PLEKHH3Q7Z736 793 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ANKRD23Q86SG2 305 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 FAM35AQ86V20 835 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 HPS6Q86YV9 775 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PLD6Q8N2A8 252 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 KYQ8NBH2 561 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ICA1LQ8NDH6 482 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 HIPK4Q8NE63 616 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 AGR3Q8TD06 166 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 AZIN2Q96A70 460 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 MFSD3Q96ES6 412 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PGAP3Q96FM1 320 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 CNDP1Q96KN2 507 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 TEKT5Q96M29 485 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PARK7Q99497 189 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 GPR22Q99680 433 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 APOL2Q9BQE5 337 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 GORASP1Q9BQQ3 440 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 MLPHQ9BV36 600 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 TRIM62Q9BVG3 475 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 TMUB1Q9BVT8 246 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 COLEC11Q9BWP8 271 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 TRIM4Q9C037 500 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 DRC3Q9H069 523 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 RHOJQ9H4E5 214 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 Q9H521 79 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 RRAGCQ9HB90 399 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 WDR6Q9NNW5 1121 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 MAN1C1Q9NR34 630 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 CHRAC1Q9NRG0 131 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ZDHHC7Q9NXF8 308 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 CPSF2Q9P2I0 782 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 OR12D3Q9UGF7 316 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 MAGED2Q9UNF1 606 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 CDYLQ9Y232 598 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 AAR2Q9Y312 384 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 PTCH2Q9Y6C5 1203 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 NUP205Q92621 2012 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 TRIP12Q14669 1992 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 RGSL1A5PLK6 1076 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 BTBD19C9JJ37 291 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 MATN2O00339 956 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 NEMP1O14524 444 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 GABRDO14764 452 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 AIM2O14862 343 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ADCY6O43306 1168 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ZBTB14O43829 449 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PEX1O43933 1283 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 CABYRO75952 493 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ANXA9O76027 345 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 DDHD2O94830 711 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 SNUPNO95149 360 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 S1PR4O95977 384 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 JCHAINP01591 159 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ZCCHC18P0CG32 403 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 UQCRBP14927 111 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 TPH1P17752 444 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PAMP19021 973 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PCSK1P29120 753 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms