RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZNF234Q14588 700 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 CYTH1Q15438 398 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 DLG2Q15700 870 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 SDE2Q6IQ49 451 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 CCDC137Q6PK04 289 aaKnown RBP12.69□□□□□ -0.38
SHMT2-221ENST00000555773 LINGO4Q6UY18 593 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 C4orf22Q6V702 233 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 CCDC105Q8IYK2 499 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 ZNF687Q8N1G0 1237 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 ZNF513Q8N8E2 541 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-221ENST00000555773 GRK7Q8WTQ7 553 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 CYB5D2Q8WUJ1 264 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 SORCS1Q8WY21 1168 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 EZH1Q92800 747 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-221ENST00000555773 RTP4Q96DX8 246 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 RPL10LQ96L21 214 aaKnown RBP12.69□□□□□ -0.38
SHMT2-221ENST00000555773 PSKH2Q96QS6 385 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 TMEM121Q9BTD3 319 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 L2HGDHQ9H9P8 463 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 RBM22Q9NW64 420 aaKnown RBP eCLIP12.69□□□□□ -0.381e-9■■■■□ 20
SHMT2-221ENST00000555773 TARSL2A2RTX5 802 aaKnown RBP12.68□□□□□ -0.38
SHMT2-221ENST00000555773 CTAGE15A4D2H0 777 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 KCNK1O00180 336 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 KCNN4O15554 427 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 GCATO75600 419 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 TMCC1O94876 653 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 CTAGE8P0CG41 777 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 CHRNB1P11230 501 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 VAV1P15498 845 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 NTSR1P30989 418 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 ACTN2P35609 894 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 MMP13P45452 471 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 CSNK1DP48730 415 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 SLC10A7Q0GE19 358 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 WASHC5Q12768 1159 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 ZNF235Q14590 738 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 FNDC3BQ53EP0 1204 aaKnown RBP12.68□□□□□ -0.38
SHMT2-221ENST00000555773 RALGPS1Q5JS13 557 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 EMC10Q5UCC4 262 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 LEKR1Q6ZMV7 388 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 TRIM67Q6ZTA4 783 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 GSTA5Q7RTV2 222 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 CTAGE6Q86UF2 777 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 SFTPA1Q8IWL2 248 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 CTAGE4Q8IX94 777 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 CHPFQ8IZ52 775 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 ALLCQ8N6M5 410 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 PCDH20Q8N6Y1 951 aaKnown RBP12.68□□□□□ -0.38
SHMT2-221ENST00000555773 FAM71DQ8N9W8 422 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 USP33Q8TEY7 942 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 FRS2Q8WU20 508 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 LRRN4Q8WUT4 740 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 MYO19Q96H55 970 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 TEKT5Q96M29 485 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 CINPQ9BW66 212 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-221ENST00000555773 TMEM245Q9H330 911 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 TBC1D17Q9HA65 648 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 LMAN1LQ9HAT1 526 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 SEPT10Q9P0V9 454 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 PCYOX1Q9UHG3 505 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 HCN2Q9UL51 889 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 NDRG2Q9UN36 371 aaKnown RBP12.68□□□□□ -0.38
SHMT2-221ENST00000555773 ATP8A1Q9Y2Q0 1164 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 TTC28Q96AY4 2481 aa12.68□□□□□ -0.38
SHMT2-221ENST00000555773 TCF20Q9UGU0 1960 aaKnown RBP12.67□□□□□ -0.38
SHMT2-221ENST00000555773 K7ERQ8 282 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 SGK1O00141 431 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 RNF103O00237 685 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 STK25O00506 426 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 SMAD6O43541 496 aaKnown RBP12.67□□□□□ -0.38
SHMT2-221ENST00000555773 OPHN1O60890 802 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 ATG13O75143 517 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 GSRP00390 522 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 PTPN3P26045 913 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 TARSP26639 723 aaKnown RBP12.67□□□□□ -0.38
SHMT2-221ENST00000555773 TIE1P35590 1138 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 MAPK8P45983 427 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 KCNJ1P48048 391 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 NUMBP49757 651 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 STK19P49842 368 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-221ENST00000555773 SEC13P55735 322 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 RHOAP61586 193 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 SNRPD1P62314 119 aaKnown RBP12.67□□□□□ -0.38
SHMT2-221ENST00000555773 UBXN2BQ14CS0 331 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 P3H1Q32P28 736 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 HNRNPA1L2Q32P51 320 aaKnown RBP12.67□□□□□ -0.38
SHMT2-221ENST00000555773 EGFLAMQ63HQ2 1017 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 TTC27Q6P3X3 843 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 SERPINA13PQ6UXR4 307 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 SYDE1Q6ZW31 735 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-221ENST00000555773 B4GALNT4Q76KP1 1039 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 CCDC89Q8N998 374 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 SLCO2A1Q92959 643 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 CLDN23Q96B33 292 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 CCDC114Q96M63 670 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 C10orf88Q9H8K7 445 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 RBM12Q9NTZ6 932 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms