RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 MAPKAPK2P49137 400 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 YBEYP58557 167 aaPredicted RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 KCNC3Q14003 757 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 CASP8Q14790 479 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 PRKD1Q15139 912 aaPredicted RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 AAK1Q2M2I8 961 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 BEND6Q5SZJ8 279 aaPredicted RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 FNBP1LQ5T0N5 605 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 ASTLQ6HA08 431 aaPredicted RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 CXorf57Q6NSI4 855 aaKnown RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 TIGD7Q6NT04 549 aaPredicted RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 CHST9Q7L1S5 443 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 PYROXD1Q8WU10 500 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 IL1RAPL1Q9NZN1 696 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 KIAA1522Q9P206 1035 aaPredicted RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 RAB21Q9UL25 225 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 CD72P21854 359 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 CD68P34810 354 aaPredicted RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 ARL4CP56559 192 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 PARP15Q460N3 678 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 ITPRIPL1Q6GPH6 555 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 SFTPA1Q8IWL2 248 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 ZNF276Q8N554 614 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 BBOF1Q8ND07 529 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 TEKT5Q96M29 485 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 GLOD4Q9HC38 313 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 NUMBLQ9Y6R0 609 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 ANAPC1Q9H1A4 1944 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 ILVBLA1L0T0 632 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 C5orf60A6NFR6 353 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 POC1B-GALNT4F8VUJ3 575 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 OPHN1O60890 802 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 CYP17A1P05093 508 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 MTHFRP42898 656 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 RGRP47804 291 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 EPHB1P54762 984 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 GEN1Q17RS7 908 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 MSS51Q4VC12 460 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 LRRC73Q5JTD7 316 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 VITQ6UXI7 678 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 RTL10Q7L3V2 364 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 VSIG1Q86XK7 387 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 CTAGE3PQ8IX95 158 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 GRIN3AQ8TCU5 1115 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 ZNF419Q96HQ0 510 aaPredicted RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 SMIM14Q96QK8 99 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 C2orf49Q9BVC5 232 aaPredicted RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 TRMT61BQ9BVS5 477 aaKnown RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 WHRNQ9P202 907 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 DEC1Q9P2X7 70 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 EVLQ9UI08 416 aaPredicted RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 CHKBQ9Y259 395 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 ZNF487B1APH4 448 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 WASH3PC4AMC7 463 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 MUSKO15146 869 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 PRKCGP05129 697 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 F7P08709 466 aaPredicted RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 PABPC1P11940 636 aaKnown RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 H2AFXP16104 143 aaPredicted RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 POLR2EP19388 210 aaKnown RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 MGAT1P26572 445 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 SSTR1P30872 391 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 DGKGP49619 791 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 PMS2P54278 862 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 SEC13P55735 322 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 POU6F1Q14863 301 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 PARP6Q2NL67 630 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 PLEKHG6Q3KR16 790 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 RNASEH2BQ5TBB1 312 aaKnown RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 CENPUQ71F23 418 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 C12orf40Q86WS4 652 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 GOLGA6L1Q8N7Z2 621 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 IFT43Q96FT9 208 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 OXNAD1Q96HP4 312 aaPredicted RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 XPO6Q96QU8 1125 aaKnown RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 UBE2ZQ9H832 354 aaPredicted RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 TBK1Q9UHD2 729 aa10.37□□□□□ -0.75
NEK9-205ENST00000555405 INTS6Q9UL03 887 aaKnown RBP10.37□□□□□ -0.75
NEK9-205ENST00000555405 MTCL1Q9Y4B5 1905 aaKnown RBP10.36□□□□□ -0.75
NEK9-205ENST00000555405 GOLGA8KD6RF30 607 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 GOLGA8TH3BQL2 631 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 STK25O00506 426 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 MTSS1O43312 755 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 TULP3O75386 442 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 GCATO75600 419 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 TMCC1O94876 653 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 TUBBP07437 444 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 HLA-EP13747 358 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 PSMC3P17980 439 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 HOXC13P31276 330 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 MAGEA4P43358 317 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 SARNPP82979 210 aaKnown RBP10.36□□□□□ -0.75
NEK9-205ENST00000555405 TMPRSS15P98073 1019 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 GALNT3Q14435 633 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 SLC29A2Q14542 456 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 PTPRRQ15256 657 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 CERCAMQ5T4B2 595 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 TMCO4Q5TGY1 634 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 EMC10Q5UCC4 262 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 FYB2Q5VWT5 728 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms