RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TEX22C9J3V5 150 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 TIPRLO75663 272 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 RNF8O76064 485 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 CBX6O95503 412 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 URODP06132 367 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 HSP90AA1P07900 732 aaKnown RBP5.77□□□□□ -1.49
VRK1-205ENST00000555402 UBL4AP11441 157 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 CD72P21854 359 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 TYK2P29597 1187 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 CLNS1AP54105 237 aaKnown RBP5.77□□□□□ -1.49
VRK1-205ENST00000555402 ARF3P61204 181 aaPredicted RBP5.77□□□□□ -1.49
VRK1-205ENST00000555402 ARF1P84077 181 aaKnown RBP5.77□□□□□ -1.49
VRK1-205ENST00000555402 TBCEQ15813 527 aaPredicted RBP5.77□□□□□ -1.49
VRK1-205ENST00000555402 C10orf76Q5T2E6 689 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 TMTC3Q6ZXV5 915 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 B4GALNT4Q76KP1 1039 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 TFAP2DQ7Z6R9 452 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 KLBQ86Z14 1044 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 GHDCQ8N2G8 530 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 KAT2BQ92831 832 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 C5orf34Q96MH7 638 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 SDF4Q9BRK5 362 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 USP44Q9H0E7 712 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 LMAN2LQ9H0V9 348 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 SLC32A1Q9H598 525 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 SEMA4BQ9NPR2 832 aaPredicted RBP5.77□□□□□ -1.49
VRK1-205ENST00000555402 TMEM248Q9NWD8 314 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 IL1RAPL1Q9NZN1 696 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 IPO11Q9UI26 975 aaKnown RBP5.77□□□□□ -1.49
VRK1-205ENST00000555402 TNFSF13BQ9Y275 285 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 DTX4Q9Y2E6 619 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 SMIM35A0A1B0GVV1 85 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 TCRBV7S3A2A0A539 114 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 PI4KAP2A4QPH2 592 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 RRHO14718 337 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 HLA-DQA2P01906 255 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 CHRM4P08173 479 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 CHRM5P08912 532 aaPredicted RBP5.76□□□□□ -1.49
VRK1-205ENST00000555402 ST6GAL1P15907 406 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 EPHA8P29322 1005 aaPredicted RBP5.76□□□□□ -1.49
VRK1-205ENST00000555402 GJC1P36383 396 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 SKIV2L2P42285 1042 aaKnown RBP5.76□□□□□ -1.49
VRK1-205ENST00000555402 UFM1P61960 85 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 SETQ01105 290 aaPredicted RBP5.76□□□□□ -1.49
VRK1-205ENST00000555402 DCTN2Q13561 401 aaKnown RBP5.76□□□□□ -1.49
VRK1-205ENST00000555402 ERV3-1Q14264 604 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 SLC18A3Q16572 532 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 PRICKLE4Q2TBC4 344 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 NAPEPLDQ6IQ20 393 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 GJB7Q6PEY0 223 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 NEK10Q6ZWH5 1172 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 RRM2BQ7LG56 351 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 CHSY1Q86X52 802 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 CNTROBQ8N137 903 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 NME8Q8N427 588 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 SMRP1Q8NCR6 262 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 DNAAF1Q8NEP3 725 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 RAB40AQ8WXH6 277 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 IP6K1Q92551 441 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 RITA1Q96K30 269 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 FCRL5Q96RD9 977 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 CLSTN3Q9BQT9 956 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.76□□□□□ -1.49
VRK1-205ENST00000555402 ERVK-5Q9HDB9 667 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 KCND2Q9NZV8 630 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 UPB1Q9UBR1 384 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 SARDHQ9UL12 918 aa5.76□□□□□ -1.49
VRK1-205ENST00000555402 TDRD9Q8NDG6 1382 aaKnown RBP5.76□□□□□ -1.49
VRK1-205ENST00000555402 CYP2D7A0A087X1C5 515 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 TEX13CA0A0J9YWL9 993 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 CYSRT1A8MQ03 144 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 GFPT2O94808 682 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 SGPL1O95470 568 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 NFATC1O95644 943 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 COX7A2P14406 83 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 MTNR1AP48039 350 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 LINC00205P59089 165 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 EFNB1P98172 346 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 NEXNQ0ZGT2 675 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 PTP4A2Q12974 167 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 PRKG2Q13237 762 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 GALNT3Q14435 633 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 AADACL2Q6P093 401 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 INO80CQ6PI98 192 aaPredicted RBP5.75□□□□□ -1.49
VRK1-205ENST00000555402 ZNF474Q6S9Z5 364 aaPredicted RBP5.75□□□□□ -1.49
VRK1-205ENST00000555402 RBM44Q6ZP01 1051 aaKnown RBP5.75□□□□□ -1.49
VRK1-205ENST00000555402 MEPCEQ7L2J0 689 aaKnown RBP5.75□□□□□ -1.49
VRK1-205ENST00000555402 RTL10Q7L3V2 364 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 FASTKD5Q7L8L6 764 aaKnown RBP5.75□□□□□ -1.49
VRK1-205ENST00000555402 NGEFQ8N5V2 710 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 EXD3Q8N9H8 876 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 SCAIQ8N9R8 606 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 FAM47BQ8NA70 645 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 OR52N4Q8NGI2 321 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 METTL6Q8TCB7 284 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 HSPH1Q92598 858 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 SAAL1Q96ER3 474 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 NEUROD6Q96NK8 337 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 IFT27Q9BW83 186 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 TXNRD2Q9NNW7 524 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms