RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 NSUN2Q08J23 767 aaKnown RBP eCLIP16.25■□□□□ 0.19
MARK3-209ENST00000555235 TRAP1Q12931 704 aaKnown RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 PDCD4Q53EL6 469 aaKnown RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 ZYG11AQ6WRX3 759 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 APOBEC3FQ8IUX4 373 aaKnown RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 MYO1HQ8N1T3 1032 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 LRTOMTQ8WZ04 291 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 DUS3LQ96G46 650 aaKnown RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 CSPG4P5Q96PW8 444 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 B3GNT5Q9BYG0 378 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 PIH1D1Q9NWS0 290 aaKnown RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 PIM2Q9P1W9 311 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 CDH7Q9ULB5 785 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 GJA3Q9Y6H8 435 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 WDR90Q96KV7 1748 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 TRIM64CA6NLI5 447 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 F5H423 210 aaPredicted RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 C2P06681 752 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 GRIA4P48058 902 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 NAA20P61599 178 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 IRF9Q00978 393 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 FRG1Q14331 258 aaKnown RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 ARL13AQ5H913 290 aaPredicted RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 ELMSAN1Q6PJG2 1045 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 CLVS1Q8IUQ0 354 aaPredicted RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.25■□□□□ 0.19
MARK3-209ENST00000555235 ZSCAN18Q8TBC5 510 aaPredicted RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 ADAM32Q8TC27 787 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 BORCS5Q969J3 196 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 ATXN7L3BQ96GX2 97 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 COX4I2Q96KJ9 171 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 UHRF1Q96T88 793 aaPredicted RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 NPAS2Q99743 824 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 ACE2Q9BYF1 805 aaPredicted RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 HIPK3Q9H422 1215 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 LRRC40Q9H9A6 602 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 GGA3Q9NZ52 723 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 AP4E1Q9UPM8 1137 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.25■□□□□ 0.19
MARK3-209ENST00000555235 SNX13Q9Y5W8 968 aa16.25■□□□□ 0.19
MARK3-209ENST00000555235 A0A087WZ62 844 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 BOLA2-SMG1P6H3BVE0 249 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 NFKBIEO00221 500 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 HTRA2O43464 458 aaPredicted RBP16.24■□□□□ 0.19
MARK3-209ENST00000555235 CABYRO75952 493 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 CSPG5O95196 566 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 PDGFRBP09619 1106 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 ZNF12P17014 697 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 SLC7A1P30825 629 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 PSME3P61289 254 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 SMAD1Q15797 465 aaKnown RBP16.24■□□□□ 0.19
MARK3-209ENST00000555235 TMEM198Q66K66 360 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 ITPRIPL1Q6GPH6 555 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 ACOT1Q86TX2 421 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 ZDHHC17Q8IUH5 632 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 FAM156AQ8NDB6 213 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 TNIP2Q8NFZ5 429 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 ADAMTS16Q8TE57 1224 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 TSNARE1Q96NA8 513 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 MRPL45Q9BRJ2 306 aaKnown RBP16.24■□□□□ 0.19
MARK3-209ENST00000555235 FDXACB1Q9BRP7 624 aaPredicted RBP16.24■□□□□ 0.19
MARK3-209ENST00000555235 UNC93B1Q9H1C4 597 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 TUBGCP4Q9UGJ1 667 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 MFHAS1Q9Y4C4 1052 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 COPG1Q9Y678 874 aaKnown RBP16.24■□□□□ 0.19
MARK3-209ENST00000555235 TRIP11Q15643 1979 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 RNF103O00237 685 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 CLASP2O75122 1294 aaKnown RBP16.24■□□□□ 0.19
MARK3-209ENST00000555235 ARF4P18085 180 aaPredicted RBP16.24■□□□□ 0.19
MARK3-209ENST00000555235 HADHAP40939 763 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 CSE1LP55060 971 aaKnown RBP16.24■□□□□ 0.19
MARK3-209ENST00000555235 SNX16P57768 344 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 TMEM62Q0P6H9 643 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 KYAT1Q16773 422 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 MTX3Q5HYI7 312 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 IRAK1BP1Q5VVH5 260 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 CES3Q6UWW8 571 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 HERC6Q8IVU3 1022 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 GRIN3AQ8TCU5 1115 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 COPS5Q92905 334 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 PBXIP1Q96AQ6 731 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 C12orf43Q96C57 262 aaKnown RBP16.24■□□□□ 0.19
MARK3-209ENST00000555235 FAM49BQ9NUQ9 324 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 EBF1Q9UH73 591 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 ZDHHC2Q9UIJ5 367 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 ANKRD6Q9Y2G4 727 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 NME7Q9Y5B8 376 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 PCDHGA7Q9Y5G6 932 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 USP3Q9Y6I4 520 aa16.24■□□□□ 0.19
MARK3-209ENST00000555235 NELFEP18615 380 aaKnown RBP16.23■□□□□ 0.19
MARK3-209ENST00000555235 TTKP33981 857 aa16.23■□□□□ 0.19
MARK3-209ENST00000555235 STX5Q13190 355 aa16.23■□□□□ 0.19
MARK3-209ENST00000555235 PPIL2Q13356 520 aa16.23■□□□□ 0.19
MARK3-209ENST00000555235 MAPRE2Q15555 327 aa16.23■□□□□ 0.19
MARK3-209ENST00000555235 ZNF829Q3KNS6 432 aaPredicted RBP16.23■□□□□ 0.19
MARK3-209ENST00000555235 NCCRP1Q6ZVX7 275 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms