RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 IL12RB1P42701 662 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 SLC20A2Q08357 652 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 SLC10A2Q12908 348 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 TFDP2Q14188 446 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 GAS6Q14393 721 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 PTPRNQ16849 979 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 GLE1Q53GS7 698 aaKnown RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 EMC10Q5UCC4 262 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 KAZNQ674X7 775 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 SLC9A4Q6AI14 798 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 DRICH1Q6PGQ1 229 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 ATPAF2Q8N5M1 289 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 PLD5Q8N7P1 536 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 ATP11CQ8NB49 1132 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 SLC35B2Q8TB61 432 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 ATG4AQ8WYN0 398 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 SEC14L1Q92503 715 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 ARHGEF2Q92974 986 aaKnown RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 ALG14Q96F25 216 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 HMCESQ96FZ2 354 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 CELF6Q96J87 481 aaKnown RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 FAM118BQ9BPY3 351 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 FBRSQ9HAH7 460 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 SP110Q9HB58 689 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 PRMT8Q9NR22 394 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 GDF3Q9NR23 364 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 NDFIP2Q9NV92 336 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 ETNK2Q9NVF9 386 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 BCCIPQ9P287 314 aaKnown RBP eCLIP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 HS3ST2Q9Y278 367 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 DRG1Q9Y295 367 aaKnown RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 EDDM13A0A1B0GTR0 161 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 TCRBV21S2A2A0A5A6 115 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 DYNC1I1O14576 645 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 TTI1O43156 1089 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 GALR2O43603 387 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 KDELR3O43731 214 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 SNAP91O60641 907 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 ADAM23O75077 832 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 TJP3O95049 919 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 H2AFXP16104 143 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 PECAM1P16284 738 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 MX2P20592 715 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 PRKCHP24723 683 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 IVDP26440 423 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 CHRNA3P32297 505 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 ACVRL1P37023 503 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 WASP42768 502 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 CTSOP43234 321 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 RECQLP46063 649 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 NUMBP49757 651 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 STK19P49842 368 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 SERPINH1P50454 418 aaKnown RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 NRLP54845 237 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 SATB1Q01826 763 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 SERINC3Q13530 473 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 SNX1Q13596 522 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 ENPP2Q13822 863 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 CRY1Q16526 586 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 HNRNPA1L2Q32P51 320 aaKnown RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 ACCSLQ4AC99 568 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 WDR93Q6P2C0 686 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 PKN3Q6P5Z2 889 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 NPNTQ6UXI9 565 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 CCNI2Q6ZMN8 369 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 RFX6Q8HWS3 928 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 LRRC49Q8IUZ0 686 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 CAMKK1Q8N5S9 505 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 NPWQ8N729 165 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 NSMCE1Q8WV22 266 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 MAIP1Q8WWC4 291 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 CASKIN2Q8WXE0 1202 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 SLCO2A1Q92959 643 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 ACOX2Q99424 681 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 ACE2Q9BYF1 805 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 CEP44Q9C0F1 390 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 TMEM245Q9H330 911 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 ZDHHC4Q9NPG8 344 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 HAUS2Q9NVX0 235 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 SUN2Q9UH99 717 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 FBXO4Q9UKT5 387 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 DNPEPQ9ULA0 475 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 MFHAS1Q9Y4C4 1052 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-218ENST00000555213 RAD54BQ9Y620 910 aa11.12□□□□□ -0.63
SHMT2-218ENST00000555213 TP73O15350 636 aa11.11□□□□□ -0.63
SHMT2-218ENST00000555213 LIASO43766 372 aa11.11□□□□□ -0.63
SHMT2-218ENST00000555213 MFSD11O43934 449 aa11.11□□□□□ -0.63
SHMT2-218ENST00000555213 RNASEH1O60930 286 aaKnown RBP11.11□□□□□ -0.63
SHMT2-218ENST00000555213 MYBL2P10244 700 aa11.11□□□□□ -0.63
SHMT2-218ENST00000555213 PAPOLAP51003 745 aaKnown RBP11.11□□□□□ -0.63
SHMT2-218ENST00000555213 VSNL1P62760 191 aa11.11□□□□□ -0.63
SHMT2-218ENST00000555213 DYNLT1P63172 113 aa11.11□□□□□ -0.63
SHMT2-218ENST00000555213 CSTF1Q05048 431 aaKnown RBP11.11□□□□□ -0.63
SHMT2-218ENST00000555213 PAFAH1B3Q15102 231 aaKnown RBP11.11□□□□□ -0.63
SHMT2-218ENST00000555213 ANGPT1Q15389 498 aa11.11□□□□□ -0.63
SHMT2-218ENST00000555213 AFMIDQ63HM1 303 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms