RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 USP33Q8TEY7 942 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 CHMP6Q96FZ7 201 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 MAGEB18Q96M61 343 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 TBL1YQ9BQ87 522 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 TACO1Q9BSH4 297 aaKnown RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 SLC25A51Q9H1U9 297 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 TREX1Q9NSU2 369 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 AAR2Q9Y312 384 aaKnown RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 PSAT1Q9Y617 370 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 KLHL33A6NCF5 533 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 CD160O95971 181 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 CORO1AP31146 461 aaKnown RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 ALDH1A3P47895 512 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 CLCN4P51793 760 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 EPHA5P54756 1037 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ERVFC1P60507 584 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 MPP3Q13368 585 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 CNTN4Q8IWV2 1026 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 C4orf33Q8N1A6 199 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 FIBCD1Q8N539 461 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 PHOSPHO2Q8TCD6 241 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ZNF599Q96NL3 588 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 RANBP9Q96S59 729 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 PPANQ9NQ55 473 aaKnown RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 GKN1Q9NS71 199 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 TRPM5Q9NZQ8 1165 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 DNMT3BQ9UBC3 853 aaKnown RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 UXTQ9UBK9 157 aaPredicted RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 INSL6Q9Y581 213 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 PCDHB12Q9Y5F1 795 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 OR51B4Q9Y5P0 310 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 A0A0D9SEW6 157 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 LOC285095A0A1B0GVY8 99 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 C2orf71A6NGG8 1288 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 SPAG7O75391 227 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 GJB3O75712 270 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 C1RP00736 705 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ATXN1LP0C7T5 689 aaKnown RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 KRT4P19013 534 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 TAC1P20366 129 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ARCN1P48444 511 aaKnown RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 SESN2P58004 480 aaPredicted RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 CDH17Q12864 832 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 LRRC14Q15048 493 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ANO4Q32M45 955 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 RFWD3Q6PCD5 774 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 PACS1Q6VY07 963 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 LEKR1Q6ZMV7 388 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 CDHR3Q6ZTQ4 885 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 LINC00523Q86TU6 105 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 CHSY1Q86X52 802 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 LRRC34Q8IZ02 419 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 LGI2Q8N0V4 545 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ATP2A3Q93084 1043 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 VOPP1Q96AW1 172 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 CERS2Q96G23 380 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 APOPT1Q96IL0 206 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ZNF512Q96ME7 567 aaPredicted RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 PPP1R2P1Q96PQ5 205 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 TRIB3Q96RU7 358 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 IL22Q9GZX6 179 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 SSX2IPQ9Y2D8 614 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ASB3Q9Y575 518 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 IQANK1A0A1B0GTG1 560 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 F5H5T6 163 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 TM9SF1O15321 606 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 MOSPD3O75425 235 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ANXA9O76027 345 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 GSRP00390 522 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 CR2P20023 1033 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 SLC7A9P82251 487 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ANKRD20A4Q4UJ75 823 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 TEDDM1Q5T9Z0 273 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 NAPEPLDQ6IQ20 393 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 PSRC1Q6PGN9 363 aaPredicted RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 POTEHQ6S545 545 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 SPRED2Q7Z698 418 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 DENND1CQ8IV53 801 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 CFAP52Q8N1V2 620 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 ALG14Q96F25 216 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 LMLNQ96KR4 655 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 RPRD1AQ96P16 312 aaPredicted RBP9.05□□□□□ -0.96
TDP1-210ENST00000554976 MAGEH1Q9H213 219 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 RBM22Q9NW64 420 aaKnown RBP eCLIP9.05□□□□□ -0.96
TDP1-210ENST00000554976 UBP1Q9NZI7 540 aa9.05□□□□□ -0.96
TDP1-210ENST00000554976 MAGEB16A2A368 324 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 AP3B1O00203 1094 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 KDELR3O43731 214 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 RAMP2O60895 175 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 ZMPSTE24O75844 475 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 ZWINTO95229 277 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 ALDOAP04075 364 aaKnown RBP9.04□□□□□ -0.96
TDP1-210ENST00000554976 PSMA3P25788 255 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 NMBRP28336 390 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 GEMP55040 296 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 LBRQ14739 615 aaKnown RBP9.04□□□□□ -0.96
TDP1-210ENST00000554976 POLD3Q15054 466 aaPredicted RBP9.04□□□□□ -0.96
TDP1-210ENST00000554976 ADGRF1Q5T601 910 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 ALKBH8Q96BT7 664 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms