RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	ACLY	P53396	1101 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	SLC10A2	Q12908	348 aa	Predicted RBP	5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	KCTD2	Q14681	263 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	CLEC9A	Q6UXN8	241 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	ANKRD33	Q7Z3H0	272 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	BCDIN3D	Q7Z5W3	292 aa	Known RBP	5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	SDR16C5	Q8N3Y7	309 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	ENAH	Q8N8S7	591 aa	Predicted RBP	5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	PARD3B	Q8TEW8	1205 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	SNX18	Q96RF0	628 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	ARPC5L	Q9BPX5	153 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	SH2D3A	Q9BRG2	576 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	TEX13B	Q9BXU2	312 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	SH2D4A	Q9H788	454 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	SLC38A10	Q9HBR0	1119 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	HEYL	Q9NQ87	328 aa	Predicted RBP	5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	MTMR4	Q9NYA4	1195 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	NRBP1	Q9UHY1	535 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	TBX21	Q9UL17	535 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	SLC27A6	Q9Y2P4	619 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956		A0A0G2JMZ2	1700 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	MYH1	P12882	1939 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	ROBO3	Q96MS0	1386 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	GRIN2D	O15399	1336 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	UMODL1	Q5DID0	1318 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	PRRT4	C9JH25	899 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956		H7C1Q1	480 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	ASGR1	P07306	291 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	MYCL	P12524	364 aa	Predicted RBP	5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	CSF2RA	P15509	400 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	MPG	P29372	298 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	ABCG1	P45844	678 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	TUBA4A	P68366	448 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	BEX3	Q00994	111 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	DEUP1	Q05D60	604 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	ACVR2B	Q13705	512 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	LONRF1	Q17RB8	773 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	C4orf46	Q504U0	113 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	AWAT1	Q58HT5	328 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	MTHFD1L	Q6UB35	978 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	CRTC1	Q6UUV9	634 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	SERPINA13P	Q6UXR4	307 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	CCDC129	Q6ZRS4	1044 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	ARMCX2	Q7L311	632 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	SRL	Q86TD4	932 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	RAB11FIP4	Q86YS3	637 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	SFTPA1	Q8IWL2	248 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	FAM133A	Q8N9E0	248 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	MAFA	Q8NHW3	353 aa	Predicted RBP	5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	DEPTOR	Q8TB45	409 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	EVI5L	Q96CN4	794 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	UPF3A	Q9H1J1	476 aa	Known RBP	5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	PLCB1	Q9NQ66	1216 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	STARD7	Q9NQZ5	370 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	PDGFC	Q9NRA1	345 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	CNPY2	Q9Y2B0	182 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	VCAN	P13611	3396 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	ZNF236	Q9UL36	1845 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	DNAH12	Q6ZR08	3092 aa		5.8	□□□□□ -1.48
PSMC6-208	ENST00000554956	LAMA2	P24043	3122 aa	Known RBP	5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	CDH23	Q9H251	3354 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956		A0A1W2PPC4	97 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	TCRBV5S1A1T	A0A578	114 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	TMEM232	C9JQI7	657 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	APOL1	O14791	398 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	NCK2	O43639	380 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	ZBED4	O75132	1171 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	DUSP11	O75319	330 aa	Known RBP	5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	LATS1	O95835	1130 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	TIMP1	P01033	207 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	SETSIP	P0DME0	302 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	MCC	P23508	829 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	CST5	P28325	142 aa	Predicted RBP	5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	RBL1	P28749	1068 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	SERPINB3	P29508	390 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	ATIC	P31939	592 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	HTR7	P34969	479 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	TDO2	P48775	406 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	COPB1	P53618	953 aa	Known RBP	5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	TFAP4	Q01664	338 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	FHL3	Q13643	280 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	PMS2P11	Q13670	270 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	DHX8	Q14562	1220 aa	Known RBP	5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	CEP78	Q5JTW2	689 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	DGKK	Q5KSL6	1271 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	ZSCAN25	Q6NSZ9	544 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	CXCL17	Q6UXB2	119 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	GMCL1P1	Q8NEA9	526 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	ZNF668	Q96K58	619 aa	Predicted RBP	5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	SGCZ	Q96LD1	299 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	CCDC138	Q96M89	665 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	COLEC11	Q9BWP8	271 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	SLC25A32	Q9H2D1	315 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	UNC80	Q8N2C7	3258 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	NAV1	Q8NEY1	1877 aa		5.79	□□□□□ -1.48
PSMC6-208	ENST00000554956	LTBP2	Q14767	1821 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	ELP1	O95163	1332 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms