RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 PDK2Q15119 407 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 TTC31Q49AM3 519 aaPredicted RBP13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 INO80DQ53TQ3 878 aaPredicted RBP13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 CARD16Q5EG05 197 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 LRRC38Q5VT99 294 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 DPY19L3Q6ZPD9 716 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 ARMCX6Q7L4S7 300 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 DSG4Q86SJ6 1040 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 ZNF354CQ86Y25 554 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 SLC41A1Q8IVJ1 513 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 TP53INP2Q8IXH6 220 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 AADATQ8N5Z0 425 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 PCDH20Q8N6Y1 951 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 NETO2Q8NC67 525 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 KCTD6Q8NC69 237 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 TMIEQ8NEW7 156 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 VOPP1Q96AW1 172 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 CCDC114Q96M63 670 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 HINFPQ9BQA5 517 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 NEUROG2Q9H2A3 272 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 SERGEFQ9UGK8 458 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 NCKAP1Q9Y2A7 1128 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 CKAP5Q14008 2032 aa13.16□□□□□ -0.3
MTHFD1-209ENST00000554768 DOCK4Q8N1I0 1966 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 ARHGAP42A6NI28 874 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 METTL12A8MUP2 240 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 RNF103O00237 685 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 BUB1BO60566 1050 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 PRAMEF11O60813 436 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 RNASEH2AO75792 299 aaKnown RBP13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 IPO7O95373 1038 aaKnown RBP13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 CTSLP07711 333 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 ITPKAP23677 461 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 GJC1P36383 396 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 METAP1P53582 386 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 ZNF33AQ06730 810 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 CYTH1Q15438 398 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 CCDC6Q16204 474 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 CSRP2Q16527 193 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 FAM46CQ5VWP2 391 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 LYSMD4Q5XG99 296 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 TMCO3Q6UWJ1 677 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 MAP7D3Q8IWC1 876 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 HDDC3Q8N4P3 179 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 GPR161Q8N6U8 529 aaKnown RBP13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 PCDH19Q8TAB3 1148 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 PIP4K2CQ8TBX8 421 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 GANCQ8TET4 914 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 CASKIN2Q8WXE0 1202 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 RAPGEF5Q92565 580 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 FOXJ1Q92949 421 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 FAM131CQ96AQ9 280 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 OMDQ99983 421 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 LACRTQ9GZZ8 138 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 BTBD1Q9H0C5 482 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 PDFQ9HBH1 243 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 SGK2Q9HBY8 427 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 SEMA4GQ9NTN9 838 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 TMEM74BQ9NUR3 256 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 HECAQ9UBI9 543 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 SALL4Q9UJQ4 1053 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 PILRBQ9UKJ0 227 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 FZD4Q9ULV1 537 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 HYOU1Q9Y4L1 999 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 ALG6Q9Y672 507 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 DUSP10Q9Y6W6 482 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 LAMA1P25391 3075 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 DMXL1Q9Y485 3027 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 ABCA7Q8IZY2 2146 aa13.15□□□□□ -0.3
MTHFD1-209ENST00000554768 EML5Q05BV3 1969 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 A0A1W2PP55 124 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 C10orf142B7Z368 130 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 DFFAO00273 331 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 PJA2O43164 708 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 TMCC1O94876 653 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 SEMA4FO95754 770 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 GSRP00390 522 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 ZNF806P0C7X5 589 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 COMTP21964 271 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 KDELR1P24390 212 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 DRD3P35462 400 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 MPLP40238 635 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 RECQLP46063 649 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 DNA2P51530 1060 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 GSDMDP57764 484 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 MYLK3Q32MK0 819 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 ANKRD20A8PQ5CZ79 823 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 ARHGAP36Q6ZRI8 547 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 CYP2U1Q7Z449 544 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 SYT12Q8IV01 421 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 KIAA2013Q8IYS2 634 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 ACRBPQ8NEB7 543 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 OR2AP1Q8NGE2 309 aa13.14□□□□□ -0.31
MTHFD1-209ENST00000554768 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms