RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CD3EP07766 207 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ZDHHC11BP0C7U3 371 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 PTPN1P18031 435 aaKnown RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ACO1P21399 889 aaKnown RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 CD27P26842 260 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 CSRP3P50461 194 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ANAPC15P60006 121 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 GOLGA8FQ08AF8 430 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 GOLGA8DPQ0D2H9 430 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 CCDC173Q0VFZ6 552 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 IFRD2Q12894 506 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ILKQ13418 452 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ENPP2Q13822 863 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 TBC1D25Q3MII6 688 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 TMEM119Q4V9L6 283 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 MDH1BQ5I0G3 518 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 HES3Q5TGS1 186 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 BROXQ5VW32 411 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 CYP2R1Q6VVX0 501 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 TPGS1Q6ZTW0 290 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 USP49Q70CQ1 688 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ZNF720Q7Z2F6 126 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 GPBP1Q86WP2 473 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 FMNL3Q8IVF7 1028 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 BRSK2Q8IWQ3 736 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 LSMEM2Q8N112 164 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ZNF248Q8NDW4 579 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 KBTBD7Q8WVZ9 684 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 SNX19Q92543 992 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 FBXO32Q969P5 355 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 WBP2Q969T9 261 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 SKA1Q96BD8 255 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 HVCN1Q96D96 273 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 MED8Q96G25 268 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 CNDP2Q96KP4 475 aaKnown RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 FIZ1Q96SL8 496 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 LLPHQ9BRT6 129 aaKnown RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 FAM213AQ9BRX8 229 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ELOVL4Q9GZR5 314 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 KLHL25Q9H0H3 589 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 SNX25Q9H3E2 840 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 TM9SF3Q9HD45 589 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 IL37Q9NZH6 218 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 LSM7Q9UK45 103 aaKnown RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 PCDHB10Q9UN67 800 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 EXOC7Q9UPT5 735 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 SLC27A6Q9Y2P4 619 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 SF3B6Q9Y3B4 125 aaKnown RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 CELSR3Q9NYQ7 3312 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 NUP205Q92621 2012 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ITPR1Q14643 2758 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 EML5Q05BV3 1969 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 MAST4O15021 2626 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 NUP210Q8TEM1 1887 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 PCDH15Q96QU1 1955 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 A0A1W2PQ27 194 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 A0A1W2PQ64 194 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 A0A1W2PQC6 194 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 ZC3H12DA2A288 527 aaKnown RBP5.06□□□□□ -1.6
ATXN3-229ENST00000554672 VILLO15195 856 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 YKT6O15498 198 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 BRINP1O60477 761 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 TBCAO75347 108 aaKnown RBP5.06□□□□□ -1.6
ATXN3-229ENST00000554672 TACC1O75410 805 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 PLA2G1BP04054 148 aaKnown RBP5.06□□□□□ -1.6
ATXN3-229ENST00000554672 TMEM191BP0C7N4 346 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 IRF1P10914 325 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 TACR1P25103 407 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 ATP5C1P36542 298 aaKnown RBP5.06□□□□□ -1.6
ATXN3-229ENST00000554672 UBA7P41226 1012 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 COPAP53621 1224 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 CACNA2D1P54289 1103 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 BCAT1P54687 386 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 CDH8P55286 799 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 C21orf59P57076 290 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 TMPRSS3P57727 454 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 CORO7P57737 925 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 PRR5P85299 388 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 E2F1Q01094 437 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 POU4F1Q01851 419 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 ZBTB16Q05516 673 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 DNAJC3Q13217 504 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 DHX8Q14562 1220 aaKnown RBP5.06□□□□□ -1.6
ATXN3-229ENST00000554672 SURF1Q15526 300 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 VWA3BQ502W6 1294 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 ARHGAP40Q5TG30 622 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 ARL6IP4Q66PJ3 421 aaKnown RBP5.06□□□□□ -1.6
ATXN3-229ENST00000554672 BICRALQ6AI39 1079 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 ADAT2Q7Z6V5 191 aaKnown RBP5.06□□□□□ -1.6
ATXN3-229ENST00000554672 FAM124AQ86V42 546 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 CCDC83Q8IWF9 413 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 FAM184AQ8NB25 1140 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 ADCY4Q8NFM4 1077 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 OR6B3Q8NGW1 331 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 OR2T3Q8NH03 318 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 SCAMP5Q8TAC9 235 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 SAP25Q8TEE9 199 aa5.06□□□□□ -1.6
ATXN3-229ENST00000554672 SNRNP27Q8WVK2 155 aaKnown RBP5.06□□□□□ -1.6
ATXN3-229ENST00000554672 RFFLQ8WZ73 363 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms