RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CDY1Q9Y6F8 540 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 WDFY4Q6ZS81 3184 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 PIEZO1Q92508 2521 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 A0A1W2PR48 441 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ANO9A1A5B4 782 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ANHXE9PGG2 379 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 H7C4K7 107 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 PIRO00625 290 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 SUV39H1O43463 412 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 XPOTO43592 962 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 TRAPPC3O43617 180 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 TMEM127O75204 238 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ABLIM3O94929 683 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 SCAF4O95104 1147 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 OAZ2O95190 189 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 SEC24AO95486 1093 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 HSP90AA1P07900 732 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 IDEP14735 1019 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 TYMPP19971 482 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 MAKP20794 623 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 HOXD13P35453 343 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 SOX5P35711 763 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ACOT2P49753 483 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 GZMKP49863 264 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 TMPRSS15P98073 1019 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 POU5F1Q01860 360 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 HTR4Q13639 388 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 TMEM132DQ14C87 1099 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 SLC5A9Q2M3M2 681 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 CTXN3Q4LDR2 81 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 RABL3Q5HYI8 236 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 CRB2Q5IJ48 1285 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 PPM1LQ5SGD2 360 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 RESP18Q5W5W9 173 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ADALQ6DHV7 355 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ZNF280DQ6N043 979 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 UNC13DQ70J99 1090 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 RTL10Q7L3V2 364 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 EPM2AIP1Q7L775 607 aaPredicted RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 GRASPQ7Z6J2 395 aaPredicted RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 CCDC65Q8IXS2 484 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 UBALD2Q8IYN6 164 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 GLB1L3Q8NCI6 653 aaPredicted RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 APPL2Q8NEU8 664 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 PRSS33Q8NF86 280 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 BEST2Q8NFU1 509 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 OR10T2Q8NGX3 314 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ITFG1Q8TB96 612 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 MDM1Q8TC05 714 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 CHAC2Q8WUX2 184 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 RSAD2Q8WXG1 361 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 POMGNT1Q8WZA1 660 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 STAMQ92783 540 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 HPS3Q969F9 1004 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ACCSQ96QU6 501 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 TSPAN18Q96SJ8 248 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 C7orf25Q9BPX7 421 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 RTP3Q9BQQ7 232 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 LSM14BQ9BX40 385 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 PANK2Q9BZ23 570 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ENKD1Q9H0I2 346 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 CUEDC2Q9H467 287 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 ASB7Q9H672 318 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 MAGEF1Q9HAY2 307 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 PANK4Q9NVE7 773 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 HCFC1R1Q9NWW0 138 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 IGSF9Q9P2J2 1179 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 DNMT3BQ9UBC3 853 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 AFF4Q9UHB7 1163 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 EIF2B4Q9UI10 523 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 AGO2Q9UKV8 859 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 PCDHA7Q9UN72 937 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 EXOC7Q9UPT5 735 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 APOBEC2Q9Y235 224 aaKnown RBP4.46□□□□□ -1.7
VTI1B-203ENST00000554636 DERAQ9Y315 318 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 C2CD2Q9Y426 696 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 YIPF1Q9Y548 306 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 INSL5Q9Y5Q6 135 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 F5P12259 2224 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 COL4A2P08572 1712 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 UBE4BO95155 1302 aa4.46□□□□□ -1.7
VTI1B-203ENST00000554636 COL4A3Q01955 1670 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 FAM237AA0A1B0GTK4 181 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 MTMR11A4FU01 709 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 GOLGA8IPA6NC78 632 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 OR6C75A6NL08 312 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 GOLGA8JA6NMD2 632 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 EIF3DO15371 548 aaKnown RBP eCLIP4.45□□□□□ -1.7
VTI1B-203ENST00000554636 POLR2DO15514 142 aaKnown RBP4.45□□□□□ -1.7
VTI1B-203ENST00000554636 KLRC4O43908 158 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 EXTL3O43909 919 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 DNAJC6O75061 913 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 MOSPD3O75425 235 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 IL18RAPO95256 599 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 RHOP08100 348 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 LTA4HP09960 611 aaKnown RBP4.45□□□□□ -1.7
VTI1B-203ENST00000554636 OR4Q2P0C623 313 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 LAMP2P13473 410 aa4.45□□□□□ -1.7
VTI1B-203ENST00000554636 GYPEP15421 78 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms