RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ZFYVE27Q5T4F4 411 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 SYCP2LQ5T4T6 812 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ERMARDQ5T6L9 678 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 TMEM215Q68D42 235 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF776Q68DI1 518 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 KIAA1211LQ6NV74 962 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ASCL5Q7RTU5 278 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 BNIPLQ7Z465 357 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 TMPRSS6Q8IU80 811 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 PSTKQ8IV42 348 aaKnown RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 APCDD1Q8J025 514 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 CCDC185Q8N715 623 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 DCAF4L2Q8NA75 395 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ATP11CQ8NB49 1132 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF564Q8TBZ8 553 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 MYEOVQ96EZ4 313 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 RPL10LQ96L21 214 aaKnown RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 FEM1AQ9BSK4 669 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 NUP85Q9BW27 656 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 THAP2Q9H0W7 228 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 DHX35Q9H5Z1 703 aaKnown RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 NHEJ1Q9H9Q4 299 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ATP13A1Q9HD20 1204 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 UVRAGQ9P2Y5 699 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 PCSK1NQ9UHG2 260 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 ANAPC7Q9UJX3 599 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 FZD10Q9ULW2 581 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 USP18Q9UMW8 372 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 SCML1Q9UN30 329 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 CYP8B1Q9UNU6 501 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 AP4E1Q9UPM8 1137 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 INVSQ9Y283 1065 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 TBC1D30Q9Y2I9 924 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 SNX10Q9Y5X0 201 aa8.54□□□□□ -1.04
PSEN1-209ENST00000553855 IGLV3-10A0A075B6K4 115 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 ANTXRLA6NF34 631 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 A6NHS1 94 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 C1QTNF3-AMACRE9PGA6 284 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 H3BRJ5 948 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 CBX4O00257 560 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 BNIP3LO60238 219 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 LRP3O75074 770 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 LRIG2O94898 1065 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 TMEM253P0C7T8 217 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 HOXC13P31276 330 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 PCK1P35558 622 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 CREB5Q02930 508 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 GNA12Q03113 381 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 CAMK2GQ13555 558 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-209ENST00000553855 POLD3Q15054 466 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-209ENST00000553855 HNRNPA1L2Q32P51 320 aaKnown RBP8.53□□□□□ -1.04
PSEN1-209ENST00000553855 PLK5Q496M5 336 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 ALFQ53S48 1182 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 PPP6R3Q5H9R7 873 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-209ENST00000553855 SPDYCQ5MJ68 293 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 FAM46CQ5VWP2 391 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 CXorf57Q6NSI4 855 aaKnown RBP8.53□□□□□ -1.04
PSEN1-209ENST00000553855 KBTBD6Q86V97 674 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 CACUL1Q86Y37 369 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 DNAAF5Q86Y56 855 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 RHOT2Q8IXI1 618 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 TXLNBQ8N3L3 684 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF366Q8N895 744 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-209ENST00000553855 SUMF1Q8NBK3 374 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 RLN3Q8WXF3 142 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 OR8D1Q8WZ84 308 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 P2RY11Q96G91 374 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 ZC3H10Q96K80 434 aaKnown RBP8.53□□□□□ -1.04
PSEN1-209ENST00000553855 MRGPRX1Q96LB2 322 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 MAGEH1Q9H213 219 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 TMEM245Q9H330 911 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 ZWILCHQ9H900 591 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 PRSS16Q9NQE7 514 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 DYRK4Q9NR20 520 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 TMEM248Q9NWD8 314 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 DMGDHQ9UI17 866 aaKnown RBP8.53□□□□□ -1.04
PSEN1-209ENST00000553855 DNAI1Q9UI46 699 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 INTS6Q9UL03 887 aaKnown RBP8.53□□□□□ -1.04
PSEN1-209ENST00000553855 HCN2Q9UL51 889 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 PCDHGA5Q9Y5G8 931 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 AK5Q9Y6K8 562 aa8.53□□□□□ -1.04
PSEN1-209ENST00000553855 ZSCAN5CA6NGD5 496 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-209ENST00000553855 MEI4A8MW99 385 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 TTC34A8MYJ7 566 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 LCE2BO14633 110 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 DCLK1O15075 740 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 CPNE3O75131 537 aaKnown RBP8.52□□□□□ -1.05
PSEN1-209ENST00000553855 SIN3BO75182 1162 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 EPN2O95208 641 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 IL1BP01584 269 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 CYP1A2P05177 515 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 CD6P30203 668 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 MIPP30301 263 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-209ENST00000553855 IDH3AP50213 366 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 DNA2P51530 1060 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 YBEYP58557 167 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-209ENST00000553855 KRT81Q14533 505 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 ELAVL3Q14576 367 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms