RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 HDAC8Q9BY41 377 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 DNAI2Q9GZS0 605 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 RAB20Q9NX57 234 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 NAALADL1Q9UQQ1 740 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 UNC13CQ8NB66 2214 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 A0A1W2PQM1 296 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 TCAF2A6NFQ2 919 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 KCNU1A8MYU2 1149 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.29□□□□□ -0.92
PRKCH-208ENST00000553846 LMO7DNF2Z398 122 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 PIK3R2O00459 728 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 YEATS4O95619 227 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 VDRP11473 427 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 SRCP12931 536 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 HGFP14210 728 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 MXI1P50539 228 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 CYP4F2P78329 520 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 CENPCQ03188 943 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 CUL2Q13617 745 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 STK38Q15208 465 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 IGFBP7Q16270 282 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 ZC3H12AQ5D1E8 599 aaKnown RBP9.29□□□□□ -0.92
PRKCH-208ENST00000553846 TTC39BQ5VTQ0 682 aaPredicted RBP9.29□□□□□ -0.92
PRKCH-208ENST00000553846 FOXR1Q6PIV2 292 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 CHSY1Q86X52 802 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 CCDC117Q8IWD4 279 aaPredicted RBP9.29□□□□□ -0.92
PRKCH-208ENST00000553846 CHST14Q8NCH0 376 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 TMIEQ8NEW7 156 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 BTN2A3PQ96KV6 586 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 SLC12A9Q9BXP2 914 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 CLPBQ9H078 707 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 ADNPQ9H2P0 1102 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 FOXJ2Q9P0K8 574 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 HESX1Q9UBX0 185 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 CEP83Q9Y592 693 aa9.29□□□□□ -0.92
PRKCH-208ENST00000553846 PRRC2CQ9Y520 2896 aaKnown RBP9.29□□□□□ -0.92
PRKCH-208ENST00000553846 PRAMEF33A0A0G2JMD5 474 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 C9orf172C9J069 976 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 H3BM21 787 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 K7ERQ8 282 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 RNF225M0QZC1 329 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-208ENST00000553846 SMAD6O43541 496 aaKnown RBP9.28□□□□□ -0.92
PRKCH-208ENST00000553846 PRAMEF10O60809 474 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 FBXO21O94952 628 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 MOCS2O96007 188 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-208ENST00000553846 CELA2BP08218 269 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-208ENST00000553846 JUNDP17535 347 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 CHRNA3P32297 505 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 NNMTP40261 264 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 ETV5P41161 510 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 CASRP41180 1078 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 RABIFP47224 123 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 ARSDP51689 593 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 ZFP36L1Q07352 338 aaKnown RBP9.28□□□□□ -0.92
PRKCH-208ENST00000553846 SPIDRQ14159 915 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 SKIDA1Q1XH10 827 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 C5orf22Q49AR2 442 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 HIST2H2BCQ6DN03 193 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 ERN2Q76MJ5 926 aaKnown RBP9.28□□□□□ -0.92
PRKCH-208ENST00000553846 RAB11FIP2Q7L804 512 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 ZNF683Q8IZ20 524 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 FBXO39Q8N4B4 442 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 LMX1AQ8TE12 382 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 PAGE5Q96GU1 130 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 HSFY1Q96LI6 401 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 LENG8Q96PV6 779 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-208ENST00000553846 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 SLC17A9Q9BYT1 436 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 FOXP3Q9BZS1 431 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 ZSCAN16Q9H4T2 348 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-208ENST00000553846 MMRN2Q9H8L6 949 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 EXOC1Q9NV70 894 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
PRKCH-208ENST00000553846 TBC1D30Q9Y2I9 924 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 FADS3Q9Y5Q0 445 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 CHD5Q8TDI0 1954 aa9.28□□□□□ -0.92
PRKCH-208ENST00000553846 RP1L1Q8IWN7 2480 aaPredicted RBP9.27□□□□□ -0.93
PRKCH-208ENST00000553846 DOCK4Q8N1I0 1966 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 F5H5T6 163 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 I6L893 689 aaPredicted RBP9.27□□□□□ -0.93
PRKCH-208ENST00000553846 KPNA3O00505 521 aaPredicted RBP9.27□□□□□ -0.93
PRKCH-208ENST00000553846 AP1G1O43747 822 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 CALUO43852 315 aaPredicted RBP9.27□□□□□ -0.93
PRKCH-208ENST00000553846 CALCAP01258 141 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 PAEPP09466 180 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 PSMC2P35998 433 aaKnown RBP9.27□□□□□ -0.93
PRKCH-208ENST00000553846 CD97P48960 835 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 PDE1CQ14123 709 aaPredicted RBP9.27□□□□□ -0.93
PRKCH-208ENST00000553846 CNGA2Q16280 664 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 C4orf17Q53FE4 359 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 KIAA1161Q6NSJ0 714 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 FBXL22Q6P050 247 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 TMPRSS9Q7Z410 1059 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 FAM26EQ8N5C1 309 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 KYQ8NBH2 561 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 CCDC150Q8NCX0 1101 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 ASB12Q8WXK4 309 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 ARHGAP9Q9BRR9 750 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 SEPT3Q9UH03 358 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms