RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 GRAMD1BQ3KR37 738 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 FBXO47Q5MNV8 452 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 ANO1Q5XXA6 986 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 MEPCEQ7L2J0 689 aaKnown RBP3.56□□□□□ -1.84
VRK1-202ENST00000553683 PATL1Q86TB9 770 aaKnown RBP3.56□□□□□ -1.84
VRK1-202ENST00000553683 HERC6Q8IVU3 1022 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 FBXL14Q8N1E6 418 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 SCAIQ8N9R8 606 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 CMASQ8NFW8 434 aaPredicted RBP3.56□□□□□ -1.84
VRK1-202ENST00000553683 ELP5Q8TE02 316 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 SLC35F5Q8WV83 523 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 NCKIPSDQ9NZQ3 722 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 UPB1Q9UBR1 384 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 SUFUQ9UMX1 484 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 ICKQ9UPZ9 632 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 RAP2CQ9Y3L5 183 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 TRIP12Q14669 1992 aaPredicted RBP3.55□□□□□ -1.84
VRK1-202ENST00000553683 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.55□□□□□ -1.84
VRK1-202ENST00000553683 LACTBL1A8MY62 500 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 HSPB6O14558 160 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 RGS14O43566 566 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 HBP1O60381 514 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 TSPAN3O60637 253 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 KRT38O76015 456 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 GLUD1P00367 558 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 CSF1P09603 554 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 GLUD2P49448 558 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 ARHGAP8P85298 464 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 ZXDBP98169 803 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 TBL3Q12788 808 aaKnown RBP3.55□□□□□ -1.84
VRK1-202ENST00000553683 GPR18Q14330 331 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 ANKRD1Q15327 319 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 SLC4A8Q2Y0W8 1093 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 ODF3L2Q3SX64 289 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 SYTL3Q4VX76 610 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 ZNF484Q5JVG2 852 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 UBAP2Q5T6F2 1119 aaKnown RBP3.55□□□□□ -1.84
VRK1-202ENST00000553683 ANKRD45Q5TZF3 282 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 TBC1D9BQ66K14 1250 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 KIAA1161Q6NSJ0 714 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 C8orf82Q6P1X6 216 aaPredicted RBP3.55□□□□□ -1.84
VRK1-202ENST00000553683 BHLHA9Q7RTU4 235 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 FTSJ3Q8IY81 847 aaKnown RBP3.55□□□□□ -1.84
VRK1-202ENST00000553683 RBFAQ8N0V3 343 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 CADM3Q8N126 398 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 ANKRD44Q8N8A2 993 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 MIB2Q96AX9 1013 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 ZPBPQ9BS86 351 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 CHODLQ9H9P2 273 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 CD93Q9NPY3 652 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 ZNF580Q9UK33 172 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 FZD10Q9ULW2 581 aa3.55□□□□□ -1.84
VRK1-202ENST00000553683 SRPRBQ9Y5M8 271 aaKnown RBP3.55□□□□□ -1.84
VRK1-202ENST00000553683 MORC2Q9Y6X9 1032 aaPredicted RBP3.55□□□□□ -1.84
VRK1-202ENST00000553683 A0A096LPK6 155 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 C17orf100A8MU93 164 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 EYA2O00167 538 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 NGFRP08138 427 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 LYL1P12980 280 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 TRAPPC10P48553 1259 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 CRYZQ08257 329 aaKnown RBP3.54□□□□□ -1.84
VRK1-202ENST00000553683 GPS2Q13227 327 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 RPE65Q16518 533 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 LRRC24Q50LG9 513 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 DCAF6Q58WW2 860 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 FSCBQ5H9T9 825 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 TMEM71Q6P5X7 295 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 Q6ZTK2 550 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 RNF144BQ7Z419 303 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.54□□□□□ -1.84
VRK1-202ENST00000553683 LRRC57Q8N9N7 239 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 CSGALNACT1Q8TDX6 532 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 AFG1LQ8WV93 481 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 TMEM170AQ8WVE7 144 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 OIT3Q8WWZ8 545 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 TBC1D20Q96BZ9 403 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 ZNF479Q96JC4 524 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 ARPC5LQ9BPX5 153 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 HERC2P3Q9BVR0 1158 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 ATP8A2Q9NTI2 1148 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 WWOXQ9NZC7 414 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 FEM1BQ9UK73 627 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 MYO6Q9UM54 1294 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 DNAJC16Q9Y2G8 782 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 GDAQ9Y2T3 454 aa3.54□□□□□ -1.84
VRK1-202ENST00000553683 RRP7AQ9Y3A4 280 aaKnown RBP3.54□□□□□ -1.84
VRK1-202ENST00000553683 BECN2A8MW95 431 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 B9A039 149 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 FAM157AC9JC47 383 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 INAFM1C9JVW0 142 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 ASAP2O43150 1006 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 SLC28A2O43868 658 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 DHX16O60231 1041 aaKnown RBP3.53□□□□□ -1.84
VRK1-202ENST00000553683 SERPINC1P01008 464 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 HSD3B1P14060 373 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 HNF1BP35680 557 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 DPP6P42658 865 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 CENPAP49450 140 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 CDH12P55289 794 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms