RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 NEBLO76041 1014 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 TMCC1O94876 653 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 DNTTP04053 509 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 TDGF1P13385 188 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 KRT10P13645 584 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 VAV1P15498 845 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 NDUFV2P19404 249 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 TGM2P21980 687 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 RHOAP61586 193 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 SNRPD1P62314 119 aaKnown RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 GBE1Q04446 702 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 DMWDQ09019 674 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 GALNT2Q10471 571 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 SFSWAPQ12872 951 aaKnown RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 RFTN1Q14699 578 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 LLGL1Q15334 1064 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 RPS6KA1Q15418 735 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 TAZQ16635 292 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 TTC31Q49AM3 519 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 USP39Q53GS9 565 aaKnown RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 INO80DQ53TQ3 878 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 BZW1Q7L1Q6 419 aaKnown RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 WDR5BQ86VZ2 330 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 STK40Q8N2I9 435 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 ALG3Q92685 438 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 ATOH1Q92858 354 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 PTPRN2Q92932 1015 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 ISG20Q96AZ6 181 aaKnown RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 HES6Q96HZ4 224 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 GDAP1L1Q96MZ0 367 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 ZNF599Q96NL3 588 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 CINPQ9BW66 212 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 TPSD1Q9BZJ3 242 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 TM6SF2Q9BZW4 377 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 TNKS2Q9H2K2 1166 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 PDFQ9HBH1 243 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 HAUS2Q9NVX0 235 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 ACTL7AQ9Y615 435 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 CHD5Q8TDI0 1954 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 CKAP5Q14008 2032 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 CACNA1IQ9P0X4 2223 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 hCG_1818297A0A087WSY0 165 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 C1QTNF3-AMACRE9PGA6 284 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 PPP1R12AO14974 1030 aaPredicted RBP14.09□□□□□ -0.15
TUBB3-202ENST00000553656 ALOX15BO15296 676 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 ZNF217O75362 1048 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 TJP3O95049 919 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 MAP3K6O95382 1288 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 IGSF6O95976 241 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 IL1BP01584 269 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 CNR2P34972 360 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 GARSP41250 739 aaKnown RBP14.09□□□□□ -0.15
TUBB3-202ENST00000553656 PSMD8P48556 350 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 NR2C2P49116 596 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 PEX5P50542 639 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 COPAP53621 1224 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 ZBTB16Q05516 673 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 TCF15Q12870 199 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 ZNF235Q14590 738 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 PDK1Q15118 436 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 CARD16Q5EG05 197 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 TMCO4Q5TGY1 634 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 FAM46CQ5VWP2 391 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 ARHGAP36Q6ZRI8 547 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 MMAAQ8IVH4 418 aaKnown RBP14.09□□□□□ -0.15
TUBB3-202ENST00000553656 TP53INP2Q8IXH6 220 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 PLD5Q8N7P1 536 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 CCNYQ8ND76 341 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 GANCQ8TET4 914 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 P3H4Q92791 437 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 HEMGNQ9BXL5 484 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 OSBPL8Q9BZF1 889 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 MKRN2Q9H000 416 aaKnown RBP14.09□□□□□ -0.15
TUBB3-202ENST00000553656 SLC6A17Q9H1V8 727 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 RSPH9Q9H1X1 276 aaPredicted RBP14.09□□□□□ -0.15
TUBB3-202ENST00000553656 CD248Q9HCU0 757 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 DTLQ9NZJ0 730 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 SEPT3Q9UH03 358 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 PYCARDQ9ULZ3 195 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 EFR3BQ9Y2G0 817 aa14.09□□□□□ -0.15
TUBB3-202ENST00000553656 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.09□□□□□ -0.15
TUBB3-202ENST00000553656 MCF2LO15068 1137 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 DDX3YO15523 660 aaKnown RBP14.08□□□□□ -0.16
TUBB3-202ENST00000553656 MAFKO60675 156 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 CD160O95971 181 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 ADH1BP00325 375 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 GSRP00390 522 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 PRNPP04156 253 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 PYGMP11217 842 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 PTPN7P35236 360 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 RPS14P62263 151 aaKnown RBP14.08□□□□□ -0.16
TUBB3-202ENST00000553656 RAD51Q06609 339 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 ZNF211Q13398 564 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-202ENST00000553656 LBRQ14739 615 aaKnown RBP14.08□□□□□ -0.16
TUBB3-202ENST00000553656 CST6Q15828 149 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 SEL1L2Q5TEA6 688 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 MEI1Q5TIA1 1274 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 CEP68Q76N32 757 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 C11orf74Q86VG3 221 aa14.08□□□□□ -0.16
TUBB3-202ENST00000553656 REXO1L1PQ8IX06 675 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms