RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ATPAF2Q8N5M1 289 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 DTWD2Q8NBA8 298 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 OR2A12Q8NGT7 310 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 SLC35B2Q8TB61 432 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 ACTL9Q8TC94 416 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 HAUS1Q96CS2 278 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 ZNF599Q96NL3 588 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 OSBPL9Q96SU4 736 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 LRFN3Q9BTN0 628 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 CEP44Q9C0F1 390 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 SLC25A13Q9UJS0 675 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 FCF1Q9Y324 198 aaKnown RBP15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 CACNA1HO95180 2353 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 MYO15AQ9UKN7 3530 aa15.12■□□□□ 0.01
MTHFD1-204ENST00000553405 USP34Q70CQ2 3546 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 RNF103O00237 685 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 DLL1O00548 723 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 CES2O00748 559 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 ATG13O75143 517 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 TJP3O95049 919 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 HOXB2P14652 356 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 MX2P20592 715 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 CCNCP24863 283 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 RGRP47804 291 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 GEMIN4P57678 1058 aaKnown RBP15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 OTUD4Q01804 1114 aaKnown RBP15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 PDK1Q15118 436 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 E2F5Q15329 346 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 TMEM31Q5JXX7 168 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 EOGTQ5NDL2 527 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 Q6ZVU0 165 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 PLPP6Q8IY26 295 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 PGBD5Q8N414 524 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 ATP11CQ8NB49 1132 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 CASKIN2Q8WXE0 1202 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 QKIQ96PU8 341 aaKnown RBP eCLIP15.11■□□□□ 0.011e-15■■■■□ 23.1
MTHFD1-204ENST00000553405 FAM129BQ96TA1 746 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 IL12RB2Q99665 862 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 C1QTNF1Q9BXJ1 281 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 MKRN2Q9H000 416 aaKnown RBP15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 UBA2Q9UBT2 640 aaPredicted RBP15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 HPCAL4Q9UM19 191 aa15.11■□□□□ 0.01
MTHFD1-204ENST00000553405 EDDM13A0A1B0GTR0 161 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 TARSL2A2RTX5 802 aaKnown RBP15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 MATN3O15232 486 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 EPHX1P07099 455 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 PRLRP16471 622 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 CR2P20023 1033 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 MSNP26038 577 aaKnown RBP15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 HOXA6P31267 233 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 ST8SIA6P61647 398 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 IFI35P80217 286 aaPredicted RBP15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 XRCC4Q13426 336 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 HNRNPDQ14103 355 aaKnown RBP15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 IHHQ14623 411 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 RFTN1Q14699 578 aaPredicted RBP15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 FAM182AQ5T1J6 154 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 SEL1L2Q5TEA6 688 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 TMCO4Q5TGY1 634 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 ALG1LQ6GMV1 187 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 B4GALNT4Q76KP1 1039 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 RASSF3Q86WH2 238 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 PCDH20Q8N6Y1 951 aaKnown RBP15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 CNTD1Q8N815 330 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 P3H4Q92791 437 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 NELL1Q92832 810 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 TRIM44Q96DX7 344 aaPredicted RBP15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 MS4A14Q96JA4 679 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 PBKQ96KB5 322 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 PSKH2Q96QS6 385 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 NAPGQ99747 312 aaPredicted RBP15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 FAM118BQ9BPY3 351 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 BRD8Q9H0E9 1235 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 RSPH9Q9H1X1 276 aaPredicted RBP15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 SP110Q9HB58 689 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 VPS13AQ96RL7 3174 aa15.1■□□□□ 0.01
MTHFD1-204ENST00000553405 ZNF185O15231 689 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 CEP104O60308 925 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 GSRP00390 522 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 FGGP02679 453 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 CTSLP07711 333 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 GABRG2P18507 467 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 CETN2P41208 172 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 DGKEP52429 567 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 WASHC5Q12768 1159 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 ZBTB17Q13105 803 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 LBRQ14739 615 aaKnown RBP15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 OASLQ15646 514 aaKnown RBP15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 SLC45A4Q5BKX6 768 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 DPY19L3Q6ZPD9 716 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 C1orf210Q8IVY1 113 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 CCDC13Q8IYE1 715 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 TSEN2Q8NCE0 465 aaKnown RBP15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 CHST14Q8NCH0 376 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 SLC6A17Q9H1V8 727 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 TNKS2Q9H2K2 1166 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 C10orf88Q9H8K7 445 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 USP29Q9HBJ7 922 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 SMARCAL1Q9NZC9 954 aa15.09■□□□□ 0.01
MTHFD1-204ENST00000553405 SUN2Q9UH99 717 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms