RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PRDM16Q9HAZ2 1276 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 ITM2CQ9NQX7 267 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 GPATCH2LQ9NWQ4 482 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 ARHGEF38Q9NXL2 777 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 DDX56Q9NY93 547 aaKnown RBP11.68□□□□□ -0.54
TMEM116-218ENST00000552839 MARK1Q9P0L2 795 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 VANGL2Q9ULK5 521 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 PYCARDQ9ULZ3 195 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 HYOU1Q9Y4L1 999 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 STON1Q9Y6Q2 735 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 DUSP10Q9Y6W6 482 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 TP53BP1Q12888 1972 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-218ENST00000552839 KNL1Q8NG31 2342 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 ITPR1Q14643 2758 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 A0A087WV48 116 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 GOLGA6L7A0A1B0GV03 622 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 LRRD1A4D1F6 860 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 FAM149AA5PLN7 773 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 METTL12A8MUP2 240 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 BCAT2O15382 392 aaPredicted RBP11.67□□□□□ -0.54
TMEM116-218ENST00000552839 TBL1XO60907 577 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 ENDOD1O94919 500 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 FTCDO95954 541 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 PRB1P04280 392 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 ADRA1BP35368 520 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 DGKGP49619 791 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 ZNF135P52742 658 aaPredicted RBP11.67□□□□□ -0.54
TMEM116-218ENST00000552839 CDH6P55285 790 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 HLA-BQ31612 363 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 MS4A13Q5J8X5 152 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 KCNT1Q5JUK3 1230 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 RFWD3Q6PCD5 774 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 ZNF354CQ86Y25 554 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 PSTKQ8IV42 348 aaKnown RBP11.67□□□□□ -0.54
TMEM116-218ENST00000552839 MFN1Q8IWA4 741 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 CCAR2Q8N163 923 aaKnown RBP11.67□□□□□ -0.54
TMEM116-218ENST00000552839 CPXM2Q8N436 756 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 ZNF557Q8N988 423 aaPredicted RBP11.67□□□□□ -0.54
TMEM116-218ENST00000552839 CADM4Q8NFZ8 388 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 RHBDD1Q8TEB9 315 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 TEKT4Q8WW24 435 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 TMA16Q96EY4 203 aaKnown RBP11.67□□□□□ -0.54
TMEM116-218ENST00000552839 P2RY11Q96G91 374 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 CALN1Q9BXU9 219 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 CATSPERBQ9H7T0 1116 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 KLHL11Q9NVR0 708 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 DONSONQ9NYP3 566 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 PLK2Q9NYY3 685 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 OR12D3Q9UGF7 316 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 EIF2B4Q9UI10 523 aaKnown RBP11.67□□□□□ -0.54
TMEM116-218ENST00000552839 XPO7Q9UIA9 1087 aaKnown RBP11.67□□□□□ -0.54
TMEM116-218ENST00000552839 FBXO10Q9UK96 956 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 FZD10Q9ULW2 581 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 BTBD3Q9Y2F9 522 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 HS3ST4Q9Y661 456 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 ALG6Q9Y672 507 aa11.67□□□□□ -0.54
TMEM116-218ENST00000552839 IGSF10Q6WRI0 2623 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 A0A0U1RQJ8 604 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 GRID2IPA4D2P6 1211 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 MIF4GDA9UHW6 222 aaKnown RBP11.66□□□□□ -0.54
TMEM116-218ENST00000552839 E9PAM4 449 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 FLRT2O43155 660 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 KLKB1P03952 638 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 EPHB2P29323 1055 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 IL12RB1P42701 662 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 TPMTP51580 245 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 AUHQ13825 339 aaKnown RBP11.66□□□□□ -0.54
TMEM116-218ENST00000552839 RAB6CQ53S08 254 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 ZNF569Q5MCW4 686 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 CCDC181Q5TID7 509 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 PIK3R6Q5UE93 754 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 IL27RAQ6UWB1 636 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 ZNF662Q6ZS27 426 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 POLNQ7Z5Q5 900 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 GALNT15Q8N3T1 639 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 CARNMT1Q8N4J0 409 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 C1orf216Q8TAB5 229 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 RBM41Q96IZ5 413 aaKnown RBP11.66□□□□□ -0.54
TMEM116-218ENST00000552839 CDC6Q99741 560 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 MAK16Q9BXY0 300 aaKnown RBP11.66□□□□□ -0.54
TMEM116-218ENST00000552839 ZYG11BQ9C0D3 744 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 RAB6CQ9H0N0 254 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 GOLPH3Q9H4A6 298 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 TMPRSS4Q9NRS4 437 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 PCDHGB2Q9Y5G2 931 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 SLCO1B1Q9Y6L6 691 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 CAPN6Q9Y6Q1 641 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 KNTC1P50748 2209 aa11.66□□□□□ -0.54
TMEM116-218ENST00000552839 MYLKQ15746 1914 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-218ENST00000552839 A0A1B0GVM2 712 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 A0A1B0GVT2 93 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 TCAF2A6NFQ2 919 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 FGF10O15520 208 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-218ENST00000552839 RHOCP08134 193 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 RARAP10276 462 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 HTR7P34969 479 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 CSNK1EP49674 416 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms