RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 TTLL3Q9Y4R7 772 aa12.92□□□□□ -0.34
CACNB3-223ENST00000552480 MAD1L1Q9Y6D9 718 aa12.92□□□□□ -0.34
CACNB3-223ENST00000552480 NUP205Q92621 2012 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 CHD5Q8TDI0 1954 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 A0A0D9SEW6 157 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 TCRBV9S1A1TA0A576 114 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 H0Y626 953 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 LUC7L3O95232 432 aaKnown RBP12.91□□□□□ -0.34
CACNB3-223ENST00000552480 TCF3P15923 654 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 PGAM1P18669 254 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 GYS2P54840 703 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 NTHL1P78549 312 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 CDH17Q12864 832 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 OLIG2Q13516 323 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 ZNF235Q14590 738 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 RFTN1Q14699 578 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-223ENST00000552480 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 MPPE1Q53F39 396 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 MPP7Q5T2T1 576 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 ZNF697Q5TEC3 545 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 EMC10Q5UCC4 262 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 RNF219Q5W0B1 726 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-223ENST00000552480 IL31Q6EBC2 164 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 UNC5AQ6ZN44 842 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 GRASPQ7Z6J2 395 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-223ENST00000552480 BBS7Q8IWZ6 715 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 BBS5Q8N3I7 341 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 CARNMT1Q8N4J0 409 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 ARFGAP2Q8N6H7 521 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 DNAAF3Q8N9W5 541 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 TDRD5Q8NAT2 981 aaKnown RBP12.91□□□□□ -0.34
CACNB3-223ENST00000552480 GSDMBQ8TAX9 411 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 IMP4Q96G21 291 aaKnown RBP12.91□□□□□ -0.34
CACNB3-223ENST00000552480 CDCA3Q99618 268 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-223ENST00000552480 DHRS4Q9BTZ2 278 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 SPON2Q9BUD6 331 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 MUC3BQ9H195 1237 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 PLAC1Q9HBJ0 212 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 ATP13A1Q9HD20 1204 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 SYBUQ9NX95 663 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 UBP1Q9NZI7 540 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 BFARQ9NZS9 450 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 PSMC3IPQ9P2W1 217 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-223ENST00000552480 UBA2Q9UBT2 640 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-223ENST00000552480 CTNNAL1Q9UBT7 734 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 ADAM21Q9UKJ8 722 aa12.91□□□□□ -0.34
CACNB3-223ENST00000552480 POC1B-GALNT4F8VUJ3 575 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 SCAMP3O14828 347 aaKnown RBP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 USP12O75317 370 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 MT-CYBP00156 380 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 PRKCHP24723 683 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 ADRA1AP35348 466 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 NRIP1P48552 1158 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 PPP2R2AP63151 447 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 SKOR1P84550 965 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 GABPB1Q06547 395 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 ITKQ08881 620 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 USP4Q13107 963 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 NR1H3Q13133 447 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 EFTUD2Q15029 972 aaKnown RBP eCLIP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 RNF43Q68DV7 783 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 ALG1LQ6GMV1 187 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 CASC4Q6P4E1 433 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 KDELC1Q6UW63 502 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 CYS1Q717R9 158 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 TAOK1Q7L7X3 1001 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 PRPF39Q86UA1 669 aaKnown RBP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 PGBD5Q8N414 524 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 TTC16Q8NEE8 873 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 IPMKQ8NFU5 416 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 SMG7Q92540 1137 aaKnown RBP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 USP13Q92995 863 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 TADA1Q96BN2 335 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 PAFAH2Q99487 392 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 FICDQ9BVA6 458 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 POLR1EQ9GZS1 481 aaKnown RBP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 SMG9Q9H0W8 520 aaKnown RBP12.9□□□□□ -0.34
CACNB3-223ENST00000552480 SFXN1Q9H9B4 322 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 SLC28A3Q9HAS3 691 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 PIDD1Q9HB75 910 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 TDP1Q9NUW8 608 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 DZANK1Q9NVP4 752 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 SAMD15Q9P1V8 674 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 SEPT3Q9UH03 358 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 CCL26Q9Y258 94 aa12.9□□□□□ -0.34
CACNB3-223ENST00000552480 MAGEB16A2A368 324 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 EPOPA6NHQ4 379 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 C1QAP02745 245 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 MMP2P08253 660 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 CEBPBP17676 345 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-223ENST00000552480 MSH2P43246 934 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 CRADDP78560 199 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 DSC2Q02487 901 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 NIPAL4Q0D2K0 466 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 CDH18Q13634 790 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 KCNC3Q14003 757 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms