RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 RETREG1Q9H6L5 497 aa6.04□□□□□ -1.44
CCDC65-204ENST00000552188 CD93Q9NPY3 652 aa6.04□□□□□ -1.44
CCDC65-204ENST00000552188 TMEM9BQ9NQ34 198 aa6.04□□□□□ -1.44
CCDC65-204ENST00000552188 USP36Q9P275 1121 aaKnown RBP6.04□□□□□ -1.44
CCDC65-204ENST00000552188 SLC6A14Q9UN76 642 aa6.04□□□□□ -1.44
CCDC65-204ENST00000552188 AP4E1Q9UPM8 1137 aa6.04□□□□□ -1.44
CCDC65-204ENST00000552188 WASF2Q9Y6W5 498 aa6.04□□□□□ -1.44
CCDC65-204ENST00000552188 IGLV3-10A0A075B6K4 115 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3DA0A087WVF3 549 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3IA0A087WXS9 549 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3EA0A087X179 549 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3KA0A087X1G2 549 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 A0A0D9SEW6 157 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 A0A1B0GTW7 788 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 A0A1W2PP55 124 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3FA6NER0 549 aaPredicted RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TMEM191CA6NGB0 347 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 METTL12A8MUP2 240 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PATE3B3GLJ2 98 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3LB9A6J9 549 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 MYO1FO00160 1098 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 EEF2KO00418 725 aaKnown RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 KPNA3O00505 521 aaPredicted RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 FGF10O15520 208 aaPredicted RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 BUB1O43683 1085 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ATP9BO43861 1147 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 SNAP91O60641 907 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 LRIG2O94898 1065 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 FSBPO95073 299 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PRNPP04156 253 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 GYPCP04921 128 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3HP0C7X1 549 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 SRCP12931 536 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 MAOBP27338 520 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 L1CAMP32004 1257 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ACSL1P33121 698 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 HTR7P34969 479 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 HOXD12P35452 270 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 EIF4A3P38919 411 aaKnown RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ARL4AP40617 200 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 MAPK8P45983 427 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 RAD51Q06609 339 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PIGHQ14442 188 aaPredicted RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ELAVL3Q14576 367 aaKnown RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ACAP1Q15027 740 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TEAD4Q15561 434 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 HADHQ16836 314 aaKnown RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 RAB6CQ53S08 254 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ODF2Q5BJF6 829 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PPP6R3Q5H9R7 873 aaPredicted RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 C9orf64Q5T6V5 341 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 STPG1Q5TH74 334 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 E4F1Q66K89 784 aaPredicted RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 HGSNATQ68CP4 663 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3GQ6DHY5 549 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3CQ6IPX1 549 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TCEAL6Q6IPX3 200 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 LINGO4Q6UY18 593 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 Q6ZVU0 165 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 USP30Q70CQ3 517 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 DGLUCYQ7Z3D6 616 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 BNIPLQ7Z465 357 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ADAT2Q7Z6V5 191 aaKnown RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PRPF39Q86UA1 669 aaKnown RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 CNGA4Q8IV77 575 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 SLC41A1Q8IVJ1 513 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 VSTM4Q8IW00 320 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D3Q8IZP1 549 aaPredicted RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PYROXD2Q8N2H3 581 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 DCAF4L2Q8NA75 395 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 CADM4Q8NFZ8 388 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 OR14C36Q8NHC7 312 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PIP4K2CQ8TBX8 421 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TCEAL3Q969E4 200 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 SKA1Q96BD8 255 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 RMDN1Q96DB5 314 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 MYO19Q96H55 970 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ZNF419Q96HQ0 510 aaPredicted RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PPP1R16AQ96I34 528 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 CCDC42Q96M95 316 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 SYT11Q9BT88 431 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 NUP85Q9BW27 656 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 RAB6CQ9H0N0 254 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PCED1AQ9H1Q7 454 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 MAGEH1Q9H213 219 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PABPC3Q9H361 631 aaKnown RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ALG2Q9H553 416 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ZWILCHQ9H900 591 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 CD248Q9HCU0 757 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ANLNQ9NQW6 1124 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TMEM248Q9NWD8 314 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 TOR4AQ9NXH8 423 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 CTTNBP2NLQ9P2B4 639 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 IP6K2Q9UHH9 426 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 EIF2B4Q9UI10 523 aaKnown RBP6.03□□□□□ -1.44
CCDC65-204ENST00000552188 VPS51Q9UID3 782 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 ANAPC7Q9UJX3 599 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 PILRBQ9UKJ0 227 aa6.03□□□□□ -1.44
CCDC65-204ENST00000552188 FZD10Q9ULW2 581 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms