RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 DMTNQ08495 405 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 TBC1D25Q3MII6 688 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 SLC39A12Q504Y0 691 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 DENND2CQ68D51 928 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 SPOCD1Q6ZMY3 1216 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 DBX2Q6ZNG2 339 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 BBS12Q6ZW61 710 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 BZW1Q7L1Q6 419 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 SLC26A9Q7LBE3 791 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 TTC9BQ8N6N2 239 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 ATAD1Q8NBU5 361 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 OSCP1Q8WVF1 389 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 KCTD13Q8WZ19 329 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 HAUS1Q96CS2 278 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 PGM2Q96G03 612 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 ATP6V1G3Q96LB4 118 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 ZIM3Q96PE6 472 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 CPXM1Q96SM3 734 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 LPIN3Q9BQK8 851 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 CCDC77Q9BR77 488 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 ZCWPW1Q9H0M4 648 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 CNOT10Q9H9A5 744 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 TMLHEQ9NVH6 421 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 RRN3Q9NYV6 651 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 RCOR3Q9P2K3 495 aaPredicted RBP12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 ZMYM5Q9UJ78 669 aa12.32□□□□□ -0.44
RBFOX1-214ENST00000552089 A0A1B0GTW7 788 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 ESYT3A0FGR9 886 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 MTMR11A4FU01 709 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 CFAP69A5D8W1 941 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 GABRDO14764 452 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 POLR3GO15318 223 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 PRPSAP2O60256 369 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 ATP2C2O75185 946 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 LRCH4O75427 683 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 TCEA3O75764 348 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 ENDOD1O94919 500 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 FBXO21O94952 628 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 OPRD1P41143 372 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 PLTPP55058 493 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 NFKB2Q00653 900 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 SLC25A11Q02978 314 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 NR1H3Q13133 447 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 GPR17Q13304 367 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 MAPRE1Q15691 268 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 HLA-BQ31612 363 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 EML3Q32P44 896 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 HSF5Q4G112 596 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 WDR45BQ5MNZ6 344 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 ZFYVE27Q5T4F4 411 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 LEKR1Q6ZMV7 388 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 SFTPA1Q8IWL2 248 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 THEM5Q8N1Q8 247 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 ZCCHC9Q8N567 271 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 OR6B3Q8NGW1 331 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 TTC25Q96NG3 672 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 MAK16Q9BXY0 300 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 FAM204AQ9H8W3 233 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 ZDHHC4Q9NPG8 344 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 GMIPQ9P107 970 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 CYP8B1Q9UNU6 501 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 NEU2Q9Y3R4 380 aa12.31□□□□□ -0.44
RBFOX1-214ENST00000552089 hCG_1818297A0A087WSY0 165 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 F8VP50 259 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 XPO1O14980 1071 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 EIF3HO15372 352 aaKnown RBP eCLIP12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 LIASO43766 372 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 SHOX2O60902 331 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 ADAM23O75077 832 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 KRT1P04264 644 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 FAM153BP0C7A2 387 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 PDGFRAP16234 1089 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 TSHRP16473 764 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 KDELR1P24390 212 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 PCSK1P29120 753 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 SDC4P31431 198 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 ADCY8P40145 1251 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 NR2C2P49116 596 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 TAS2R40P59535 323 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 IFFO1Q0D2I5 559 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 VEPH1Q14D04 833 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 MORF4L2Q15014 288 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 SUZ12Q15022 739 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 FAM153CQ494X1 144 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 FAM102AQ5T9C2 384 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 IL27RAQ6UWB1 636 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 STRADAQ7RTN6 431 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 KCTD6Q8NC69 237 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 ZNF248Q8NDW4 579 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 ZNF419Q96HQ0 510 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 PKMYT1Q99640 499 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 FERMT1Q9BQL6 677 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 OXCT2Q9BYC2 517 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 DPEP3Q9H4B8 488 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 TMBIM4Q9HC24 238 aa12.3□□□□□ -0.44
RBFOX1-214ENST00000552089 GRHL1Q9NZI5 618 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms