RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 HS3ST3A1Q9Y663 406 aa14.79□□□□□ -0.04
VPS29-209ENST00000551655 IKBKBO14920 756 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 ALOX15BO15296 676 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 NR3C1P04150 777 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 FYNP06241 537 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 ANXA6P08133 673 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 KRT7P08729 469 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 CCKBRP32239 447 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 NOS2P35228 1153 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 IRAK1P51617 712 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 VAMP7P51809 220 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 MLLT10P55197 1068 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 PHACTR4Q8IZ21 702 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 C9orf43Q8TAL5 461 aaPredicted RBP14.78□□□□□ -0.04
VPS29-209ENST00000551655 GLMNQ92990 594 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 PMEPA1Q969W9 287 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 ALG14Q96F25 216 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 SLC39A13Q96H72 371 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 C7orf25Q9BPX7 421 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 SLC17A9Q9BYT1 436 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 LRRC27Q9C0I9 530 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 CNGB3Q9NQW8 809 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 SPASTQ9UBP0 616 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 SLC25A13Q9UJS0 675 aa14.78□□□□□ -0.04
VPS29-209ENST00000551655 LMO7DNF2Z398 122 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 K7ERQ8 282 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 MT-CO1P00395 513 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 LTFP02788 710 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 TSHRP16473 764 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 NR1D1P20393 614 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 CHRNA3P32297 505 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 RABIFP47224 123 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 CD97P48960 835 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 CENPCQ03188 943 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 SULT2A1Q06520 285 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 CNNM4Q6P4Q7 775 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 ERN2Q76MJ5 926 aaKnown RBP14.77□□□□□ -0.05
VPS29-209ENST00000551655 TMPRSS9Q7Z410 1059 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 TAC4Q86UU9 113 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 SLC9A9Q8IVB4 645 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 SH2D3CQ8N5H7 860 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 KIAA0895Q8NCT3 520 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 GRIN3AQ8TCU5 1115 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 USP28Q96RU2 1077 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 KLF6Q99612 283 aaPredicted RBP14.77□□□□□ -0.05
VPS29-209ENST00000551655 DNAI2Q9GZS0 605 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 TUBD1Q9UJT1 453 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 NAALADL1Q9UQQ1 740 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 UNC13CQ8NB66 2214 aa14.77□□□□□ -0.05
VPS29-209ENST00000551655 A0A1W2PQ27 194 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 A0A1W2PQ64 194 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 A0A1W2PQC6 194 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 LIFP15018 202 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 CD19P15391 556 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 PLK1P53350 603 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 RIPPLY3P57055 190 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 STK4Q13043 487 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 CUL4BQ13620 913 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 ZC3H12AQ5D1E8 599 aaKnown RBP14.76□□□□□ -0.05
VPS29-209ENST00000551655 ESRP1Q6NXG1 681 aaKnown RBP14.76□□□□□ -0.05
VPS29-209ENST00000551655 PMF1Q6P1K2 205 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 NYAP1Q6ZVC0 841 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 ATCAYQ86WG3 371 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 GRAMD1CQ8IYS0 662 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 Q8N9G6 341 aaPredicted RBP14.76□□□□□ -0.05
VPS29-209ENST00000551655 OR2A12Q8NGT7 310 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 PCDH19Q8TAB3 1148 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 GOLGA5Q8TBA6 731 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 KCTD13Q8WZ19 329 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 EEF2KMTQ96G04 330 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 TMEM74Q96NL1 305 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 MIS12Q9H081 205 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 KCTD10Q9H3F6 313 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 LRRN3Q9H3W5 708 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 DYRK4Q9NR20 520 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 HESX1Q9UBX0 185 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 TLR6Q9Y2C9 796 aa14.76□□□□□ -0.05
VPS29-209ENST00000551655 OTOGQ6ZRI0 2925 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 TMX2-CTNND1H3BSU7 103 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 RIOK3O14730 519 aaKnown RBP14.75□□□□□ -0.05
VPS29-209ENST00000551655 FPGTO14772 594 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 SRCP12931 536 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 GNLYP22749 145 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 ARSDP51689 593 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 PFN3P60673 137 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 NUCB2P80303 420 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 AMPD3Q01432 767 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 SLC12A1Q13621 1099 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 ARSIQ5FYB1 569 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 SCML4Q8N228 414 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 ARL10Q8N8L6 244 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 SPATA20Q8TB22 786 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 FAM174AQ8TBP5 190 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 BTN2A2Q8WVV5 523 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 NKD1Q969G9 470 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 ABHD17AQ96GS6 310 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 SERPINB11Q96P15 392 aa14.75□□□□□ -0.05
VPS29-209ENST00000551655 IGLON5A6NGN9 336 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 F5H5T6 163 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 O00370 1275 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms