RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SCAF8Q9UPN6 1271 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 SHOC2Q9UQ13 582 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PTPN22Q9Y2R2 807 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 NOSIPQ9Y314 301 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PLLPQ9Y342 182 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 RBMX2Q9Y388 322 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 UGT2A1Q9Y4X1 527 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PCDHGA3Q9Y5H0 932 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 MN1Q10571 1320 aaPredicted RBP5.4□□□□□ -1.55
LSM3P2-201ENST00000551246 ARAP2Q8WZ64 1704 aa5.4□□□□□ -1.55
LSM3P2-201ENST00000551246 CCDC88AQ3V6T2 1871 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 TEX51A0A1B0GUA7 166 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 LRRIQ4A6NIV6 560 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 MEI4A8MW99 385 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC22A2O15244 555 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 DHX15O43143 795 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 HTRA2O43464 458 aaPredicted RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 DYRK3O43781 588 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 KLHL41O60662 606 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 RNASEH2AO75792 299 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 ALDH1A2O94788 518 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 SLITRK3O94933 977 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 IL18RAPO95256 599 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 STAMBPO95630 424 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 FTLP02792 175 aaPredicted RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 FYNP06241 537 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 GSTM1P09488 218 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 EEF2P13639 858 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 TNFAIP3P21580 790 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 IL32P24001 234 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 ITGB7P26010 798 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 MAP4P27816 1152 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 PTPN7P35236 360 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 OPRL1P41146 370 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 ASPAP45381 313 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 PHKA1P46020 1223 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 CRKP46108 304 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 CLCNKBP51801 687 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 AP2S1P53680 142 aaPredicted RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 AQP5P55064 265 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 TPTEP56180 551 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 STX1BP61266 288 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 TARDBPQ13148 414 aaKnown RBP eCLIP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 PMS2P3Q13401 168 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 PRKG1Q13976 671 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 TFDP1Q14186 410 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 TTLL4Q14679 1199 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 RAB39AQ14964 217 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 FASTKD3Q14CZ7 662 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 HERC3Q15034 1050 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 GPR162Q16538 588 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 ANO4Q32M45 955 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 PPM1JQ5JR12 505 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF484Q5JVG2 852 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 IFIT1BQ5T764 474 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 TEDDM1Q5T9Z0 273 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 FAXCQ5TGI0 409 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 MEX3CQ5U5Q3 659 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 ATG16L1Q676U5 607 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 GALNT18Q6P9A2 607 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 GJB7Q6PEY0 223 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 SEZ6L2Q6UXD5 910 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 PLEKHG7Q6ZR37 379 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM196AQ6ZSG2 479 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 DENND5BQ6ZUT9 1274 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 USP51Q70EK9 711 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 UBE3DQ7Z6J8 389 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 C12orf40Q86WS4 652 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 HERC6Q8IVU3 1022 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 CLYBLQ8N0X4 340 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 PARP8Q8N3A8 854 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 CMASQ8NFW8 434 aaPredicted RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 RASGRP4Q8TDF6 673 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 FBLIM1Q8WUP2 373 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 OSCP1Q8WVF1 389 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC44A1Q8WWI5 657 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC5A5Q92911 643 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 TOP1MTQ969P6 601 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 GIMAP5Q96F15 307 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 SERAC1Q96JX3 654 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 CNDP1Q96KN2 507 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 VPS35Q96QK1 796 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 WRNIP1Q96S55 665 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 CDK5RAP1Q96SZ6 601 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 CSF3RQ99062 836 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 BCL7BQ9BQE9 202 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 RIOK1Q9BRS2 568 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 C17orf80Q9BSJ5 609 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 BTBD2Q9BX70 525 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 LRRC3Q9BY71 257 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 WDR12Q9GZL7 423 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 KLHL25Q9H0H3 589 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 C12orf65Q9H3J6 166 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 ATXN3LQ9H3M9 355 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 SEMA6CQ9H3T2 930 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 COQ10BQ9H8M1 238 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC52A2Q9HAB3 445 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 MKNK2Q9HBH9 465 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 CNGB3Q9NQW8 809 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms