RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 PACSIN1Q9BY11 444 aa10.23□□□□□ -0.77
PFDN5-213ENST00000550964 MKRN2Q9H000 416 aaKnown RBP10.23□□□□□ -0.77
PFDN5-213ENST00000550964 BRD8Q9H0E9 1235 aa10.23□□□□□ -0.77
PFDN5-213ENST00000550964 PABPC3Q9H361 631 aaKnown RBP10.23□□□□□ -0.77
PFDN5-213ENST00000550964 SP110Q9HB58 689 aa10.23□□□□□ -0.77
PFDN5-213ENST00000550964 FAM86C1Q9NVL1 165 aa10.23□□□□□ -0.77
PFDN5-213ENST00000550964 C2orf42Q9NWW7 574 aa10.23□□□□□ -0.77
PFDN5-213ENST00000550964 WSB2Q9NYS7 404 aaPredicted RBP10.23□□□□□ -0.77
PFDN5-213ENST00000550964 CWC15Q9P013 229 aaKnown RBP10.23□□□□□ -0.77
PFDN5-213ENST00000550964 UBA2Q9UBT2 640 aaPredicted RBP10.23□□□□□ -0.77
PFDN5-213ENST00000550964 AMACRQ9UHK6 382 aa10.23□□□□□ -0.77
PFDN5-213ENST00000550964 SNX10Q9Y5X0 201 aa10.23□□□□□ -0.77
PFDN5-213ENST00000550964 FAM186AA6NE01 2351 aa10.23□□□□□ -0.77
PFDN5-213ENST00000550964 IGHV1OR15-9A0A0B4J2B8 117 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 CCDC66A2RUB6 948 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 ZMPSTE24O75844 475 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 NEBLO76041 1014 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 KRT10P13645 584 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 CHRNA3P32297 505 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 CTSOP43234 321 aaPredicted RBP10.22□□□□□ -0.77
PFDN5-213ENST00000550964 CSNK1DP48730 415 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 DHPSP49366 369 aaPredicted RBP10.22□□□□□ -0.77
PFDN5-213ENST00000550964 DNA2P51530 1060 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 IRAK1P51617 712 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 COPS2P61201 443 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 RHOAP61586 193 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 POLR2LP62875 67 aaKnown RBP10.22□□□□□ -0.77
PFDN5-213ENST00000550964 LMNB2Q03252 620 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 DPYSQ14117 519 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 CSRP2Q16527 193 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 SMTNL2Q2TAL5 461 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 SLC45A4Q5BKX6 768 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 LYSMD4Q5XG99 296 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 DNAAF5Q86Y56 855 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 SYT12Q8IV01 421 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 RCOR2Q8IZ40 523 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 ATPAF2Q8N5M1 289 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 OR2AP1Q8NGE2 309 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 FAM174AQ8TBP5 190 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 FRS2Q8WU20 508 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 FATE1Q969F0 183 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 ZNF419Q96HQ0 510 aaPredicted RBP10.22□□□□□ -0.77
PFDN5-213ENST00000550964 CSPG4P5Q96PW8 444 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 PEBP4Q96S96 227 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 PSMB7Q99436 277 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 CPEB1Q9BZB8 566 aaKnown RBP10.22□□□□□ -0.77
PFDN5-213ENST00000550964 TRIM7Q9C029 511 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 LRRC19Q9H756 370 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 PCDH18Q9HCL0 1135 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 OSGEPQ9NPF4 335 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 FBXL12Q9NXK8 326 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 IL36AQ9UHA7 158 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 CYP8B1Q9UNU6 501 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 MFHAS1Q9Y4C4 1052 aa10.22□□□□□ -0.77
PFDN5-213ENST00000550964 RIF1Q5UIP0 2472 aaKnown RBP10.22□□□□□ -0.77
PFDN5-213ENST00000550964 TNRC6BQ9UPQ9 1833 aaKnown RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 ANKRD36A6QL64 1941 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 LRRD1A4D1F6 860 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 SOWAHDA6NJG2 315 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 TMEM110-MUSTN1A8MSY1 372 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 MEI4A8MW99 385 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 MIF4GDA9UHW6 222 aaKnown RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 SNAP91O60641 907 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 MAGEC1O60732 1142 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 PRAMEF11O60813 436 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 RNGTTO60942 597 aaKnown RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 PALMO75781 387 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 RNASEH2AO75792 299 aaKnown RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 ZRANB2O95218 330 aaKnown RBP eCLIP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 SEMA4FO95754 770 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 SYPP08247 313 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 CCDC175P0C221 793 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 ZNF806P0C7X5 589 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 CA4P22748 312 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 KDELR1P24390 212 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 IL1R2P27930 398 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 NR2C2P49116 596 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 STK19P49842 368 aaPredicted RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 PAPOLAP51003 745 aaKnown RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 ARF5P84085 180 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 DMWDQ09019 674 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 DUOXA1Q1HG43 343 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 RAB6CQ53S08 254 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 ANKRD20A8PQ5CZ79 823 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 CFAP58Q5T655 872 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 AFMIDQ63HM1 303 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 Q6ZVU0 165 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 CYP4V2Q6ZWL3 525 aaPredicted RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 MMAAQ8IVH4 418 aaKnown RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 NDUFAF2Q8N183 169 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 STK40Q8N2I9 435 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 RYBPQ8N488 228 aaPredicted RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 UBL4BQ8N7F7 174 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 C12orf50Q8NA57 414 aaPredicted RBP10.21□□□□□ -0.77
PFDN5-213ENST00000550964 OR2A12Q8NGT7 310 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 OR2T34Q8NGX1 318 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 PIP4K2CQ8TBX8 421 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 TSC1Q92574 1164 aa10.21□□□□□ -0.77
PFDN5-213ENST00000550964 HMCESQ96FZ2 354 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms