RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ADCY8P40145 1251 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 USP8P40818 1118 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 TUFMP49411 452 aaKnown RBP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 FXR1P51114 621 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 PDE6CP51160 858 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 SLC8A3P57103 927 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 RPL10AP62906 217 aaKnown RBP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 CDR2Q01850 454 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 ROR1Q01973 937 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF460Q14592 562 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 ICAM4Q14773 271 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 ASIC2Q16515 512 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 CATSPEREQ5SY80 951 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 PPP1R2P3Q6NXS1 205 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 PRSS55Q6UWB4 352 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 VSTM1Q6UX27 236 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 TRIM72Q6ZMU5 477 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 CXXC5Q7LFL8 322 aaKnown RBP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 IRF2BP2Q7Z5L9 587 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 ACOT1Q86TX2 421 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 VPS36Q86VN1 386 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 CIR1Q86X95 450 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 SPATA2LQ8IUW3 424 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 TCEAL8Q8IYN2 117 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 FUKQ8N0W3 1084 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 ANKRD52Q8NB46 1076 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 HIPK4Q8NE63 616 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 SPPL2BQ8TCT7 592 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 DVL3Q92997 716 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 PDLIM2Q96JY6 352 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 KLHL5Q96PQ7 755 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 TWNKQ96RR1 684 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 BOCQ9BWV1 1114 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 UBXN6Q9BZV1 441 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 LHX5Q9H2C1 402 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 TTYH1Q9H313 450 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 PLEKHA4Q9H4M7 779 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 CSNK1G1Q9HCP0 422 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 PNPLA8Q9NP80 782 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 ABHD10Q9NUJ1 306 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 HESX1Q9UBX0 185 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 AFF4Q9UHB7 1163 aaKnown RBP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 GTF3C4Q9UKN8 822 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCAF11-213ENST00000550629 NME7Q9Y5B8 376 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 LAMA3Q16787 3333 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 GBF1Q92538 1859 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 TRIOBPQ9H2D6 2365 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SCN1AP35498 2009 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 NLRC5Q86WI3 1866 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 MYBPHLA2RUH7 354 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 EPOPA6NHQ4 379 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 HIDE1A8MVS5 230 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 ADAM12O43184 909 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 OPA1O60313 960 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 ATP2C2O75185 946 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 KRT37O76014 449 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 GLUD1P00367 558 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 HNRNPA1P09651 372 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCAF11-213ENST00000550629 FAM200BP0CF97 657 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SETSIPP0DME0 302 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SRGAP2BP0DMP2 458 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 CD19P15391 556 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 ACAT1P24752 427 aaKnown RBP6.03□□□□□ -1.44
SCAF11-213ENST00000550629 KLRC2P26717 231 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 HOXA9P31269 272 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 ETV4P43268 484 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 CLCN4P51793 760 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 BCAT1P54687 386 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 RRADP55042 308 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SNX16P57768 344 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 PSMC1P62191 440 aaKnown RBP6.03□□□□□ -1.44
SCAF11-213ENST00000550629 CD83Q01151 205 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 KLHL30Q0D2K2 578 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 PLD1Q13393 1074 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 PTPN21Q16825 1174 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 DUSP6Q16828 381 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SLC39A12Q504Y0 691 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 MDH1BQ5I0G3 518 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 LIN9Q5TKA1 542 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 PLPP4Q5VZY2 271 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 KANK2Q63ZY3 851 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 CYP26C1Q6V0L0 522 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 TMEM184AQ6ZMB5 413 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 CCDC149Q6ZUS6 474 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 LRRTM3Q86VH5 581 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SLC47A2Q86VL8 602 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 C12orf29Q8N999 325 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 TC2NQ8N9U0 490 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SLC2A14Q8TDB8 520 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 GDPD5Q8WTR4 605 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SLC22A17Q8WUG5 538 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF606Q8WXB4 792 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 AUTS2Q8WXX7 1259 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 TFAP2BQ92481 460 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 MYLPFQ96A32 169 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 CYFIP2Q96F07 1278 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SMARCD1Q96GM5 515 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 PCED1BQ96HM7 432 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SPATA17Q96L03 361 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms