RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TFAP2DQ7Z6R9 452 aa23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 FAM71AQ8IYT1 594 aa23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 SLC25A45Q8N413 288 aa23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 SNIP1Q8TAD8 396 aaKnown RBP23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 ARRDC3Q96B67 414 aa23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 HAPLN3Q96S86 360 aa23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 CEP44Q9C0F1 390 aa23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 ABCG4Q9H172 646 aa23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 PLCB1Q9NQ66 1216 aa23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 LAMA5O15230 3695 aa23.58■■□□□ 1.37
SMARCD1-209ENST00000550477 TDRD6O60522 2096 aaKnown RBP23.58■■□□□ 1.36
SMARCD1-209ENST00000550477 SHROOM3Q8TF72 1996 aa23.58■■□□□ 1.36
SMARCD1-209ENST00000550477 A6NNZ2 444 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 K7ERQ8 282 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 TRIM38O00635 465 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 ETFBP38117 255 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 GABRB2P47870 512 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 DNA2P51530 1060 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 UBE2HP62256 183 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 KIAA1161Q6NSJ0 714 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 LINGO4Q6UY18 593 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 KDM7AQ6ZMT4 941 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 PCDH20Q8N6Y1 951 aaKnown RBP23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 DCBLD1Q8N8Z6 715 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 GRIN3AQ8TCU5 1115 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 TBCBQ99426 244 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 ZYG11BQ9C0D3 744 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 NDST4Q9H3R1 872 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 USP29Q9HBJ7 922 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 ATP13A1Q9HD20 1204 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 NLGN3Q9NZ94 848 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 MPP6Q9NZW5 540 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 IPO11Q9UI26 975 aaKnown RBP23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 TRPM6Q9BX84 2022 aa23.57■■□□□ 1.36
SMARCD1-209ENST00000550477 A0A0D9SEW6 157 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 H3BM21 787 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 TK2O00142 265 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 PES1O00541 588 aaKnown RBP23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 FFAR2O15552 330 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 LEFTY1O75610 366 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 PIAS2O75928 621 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 ITPKBP27987 946 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 CDH5P33151 784 aaPredicted RBP23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 HNRNPKP61978 463 aaKnown RBP eCLIP23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 C19orf57Q0VDD7 668 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 VWA3BQ502W6 1294 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 DPY19L3Q6ZPD9 716 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 LSMEM2Q8N112 164 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 OR13H1Q8NG92 308 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 HEPHQ9BQS7 1158 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 SLC17A9Q9BYT1 436 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 TNKS2Q9H2K2 1166 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 SIX2Q9NPC8 291 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 DACH1Q9UI36 760 aa23.56■■□□□ 1.36
SMARCD1-209ENST00000550477 IGLV3-10A0A075B6K4 115 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 RIOK3O14730 519 aaKnown RBP23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 SMAD6O43541 496 aaKnown RBP23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 TLX3O43711 291 aaPredicted RBP23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 BRINP1O60477 761 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 ENDOD1O94919 500 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 LSM8O95777 96 aaKnown RBP23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 CKMT1AP12532 417 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 CYP11B1P15538 503 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 SGCGQ13326 291 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 MAPK8IP2Q13387 824 aaPredicted RBP23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 DRAP1Q14919 205 aaPredicted RBP23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 ARL13BQ3SXY8 428 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 CARD16Q5EG05 197 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 Q6ZSR6 202 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 TMC6Q7Z403 805 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 PTAR1Q7Z6K3 402 aaPredicted RBP23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 ABI3BPQ7Z7G0 1075 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 IRF2BP1Q8IU81 584 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 ZNF683Q8IZ20 524 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 CHST14Q8NCH0 376 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 BBC3Q96PG8 261 aaPredicted RBP23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 DEPDC7Q96QD5 511 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 RETREG1Q9H6L5 497 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 FZD3Q9NPG1 666 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 DNAJC28Q9NX36 388 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 NCKIPSDQ9NZQ3 722 aa23.55■■□□□ 1.36
SMARCD1-209ENST00000550477 GP1BAP07359 652 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 TFE3P19532 575 aaPredicted RBP23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 ITGB7P26010 798 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 L1CAMP32004 1257 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 SERPINH1P50454 418 aaKnown RBP23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 GEMIN4P57678 1058 aaKnown RBP23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 TBC1D25Q3MII6 688 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 OTUD1Q5VV17 481 aaPredicted RBP23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 XYLT1Q86Y38 959 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 LSM14AQ8ND56 463 aaKnown RBP23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 OR7D4Q8NG98 312 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 TUBGCP2Q9BSJ2 902 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 UCKL1Q9NWZ5 548 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 PPARGC1AQ9UBK2 798 aaKnown RBP23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 HPCAL4Q9UM19 191 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 SNX10Q9Y5X0 201 aa23.54■■□□□ 1.36
SMARCD1-209ENST00000550477 CXorf51AA0A1B0GTR3 108 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 NEMP1O14524 444 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 SCAMP1O15126 338 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms