RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 COPS6Q7L5N1 327 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TECPR1Q7Z6L1 1165 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TRIM74Q86UV6 250 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TRIM73Q86UV7 250 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 VPS36Q86VN1 386 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 LRRC43Q8N309 656 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 RASGEF1CQ8N431 466 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 PIGOQ8TEQ8 1089 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 ATP8B4Q8TF62 1192 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 UBLCP1Q8WVY7 318 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 DYDC1Q8WWB3 177 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 MAIP1Q8WWC4 291 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 DNAJC9Q8WXX5 260 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 KIFAP3Q92845 792 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 KAT5Q92993 513 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 OPTNQ96CV9 577 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 CNOT6LQ96LI5 555 aaKnown RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 AIFM3Q96NN9 605 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 OLFM3Q96PB7 478 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 IWS1Q96ST2 819 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 FMO2Q99518 471 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TSG101Q99816 390 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SMOQ99835 787 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 MYD88Q99836 296 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 ALG8Q9BVK2 526 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TIPINQ9BVW5 301 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SPZ1Q9BXG8 430 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 ACTRT3Q9BYD9 372 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TPSD1Q9BZJ3 242 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 DCLRE1BQ9H816 532 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 MLXIPQ9HAP2 919 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SAR1AQ9NR31 198 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 GJB4Q9NTQ9 266 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 AGPAT5Q9NUQ2 364 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 CYP39A1Q9NYL5 469 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 EHD3Q9NZN3 535 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SH3BP4Q9P0V3 963 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SUCLA2Q9P2R7 463 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 MTRF1LQ9UGC7 380 aaKnown RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 FBXL5Q9UKA1 691 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SSX2IPQ9Y2D8 614 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 ATP6V0A2Q9Y487 856 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 COMMD3-BMI1R4GMX3 469 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TMEM2Q9UHN6 1383 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 BCL9O00512 1426 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 LRP6O75581 1613 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 PRSS29PA6NIE9 313 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 F2RL2O00254 374 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 PPP6CO00743 305 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 MAPK13O15264 365 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 NVLO15381 856 aaKnown RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 MAGEB2O15479 319 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 ZSCAN9O15535 394 aaPredicted RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 SKAP2O75563 359 aaPredicted RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 TMCC1O94876 653 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 ZWINTO95229 277 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 TOP3BO95985 862 aaKnown RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 ANXA1P04083 346 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 PDHA1P08559 390 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 CYP2D6P10635 497 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 RARGP13631 454 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 IDO1P14902 403 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 CHN1P15882 459 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 DESP17661 470 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 SP100P23497 879 aaPredicted RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 TMOD1P28289 359 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 VHLP40337 213 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 UBA7P41226 1012 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 CD151P48509 253 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 PMS2P54278 862 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 PTENP60484 403 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 RPL26P61254 145 aaKnown RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 TIMM10P62072 90 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 DEUP1Q05D60 604 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 AIMP1Q12904 312 aaKnown RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 ITGA9Q13797 1035 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 PLS1Q14651 629 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 RAB39AQ14964 217 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 INAVAQ3KP66 663 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 USH1GQ495M9 461 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 FAM133BQ5BKY9 247 aaKnown RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 HHATQ5VTY9 493 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 SLC9A4Q6AI14 798 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 OR52E8Q6IFG1 317 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 ANO7Q6IWH7 933 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 SLC18B1Q6NT16 456 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF790Q6PG37 636 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 PPP1R21Q6ZMI0 780 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 GADL1Q6ZQY3 521 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 RGS9BPQ6ZS82 235 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 USP49Q70CQ1 688 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 TRMT10CQ7L0Y3 403 aaKnown RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 RRAGAQ7L523 313 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF551Q7Z340 670 aaPredicted RBP3.45□□□□□ -1.86
CCNT1-203ENST00000550457 CATIPQ7Z7H3 387 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 SLFN11Q7Z7L1 901 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 TBC1D10CQ8IV04 446 aa3.45□□□□□ -1.86
CCNT1-203ENST00000550457 LRRC34Q8IZ02 419 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms