RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 BNC2Q6ZN30 1099 aaPredicted RBP17.13■□□□□ 0.33
ATXN2-219ENST00000550104 LPCAT1Q8NF37 534 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 SIKE1Q9BRV8 207 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 CENPKQ9BS16 269 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 ZYG11BQ9C0D3 744 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 POMKQ9H5K3 350 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 GLOD4Q9HC38 313 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 ATP13A1Q9HD20 1204 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 NMRK2Q9NPI5 230 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 OLA1Q9NTK5 396 aaKnown RBP17.13■□□□□ 0.33
ATXN2-219ENST00000550104 ANKRD6Q9Y2G4 727 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 PKP3Q9Y446 797 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 GRIA4P48058 902 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 OLIG2Q13516 323 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 TRMT13Q9NUP7 481 aaKnown RBP17.13■□□□□ 0.33
ATXN2-219ENST00000550104 UTP6Q9NYH9 597 aaKnown RBP17.13■□□□□ 0.33
ATXN2-219ENST00000550104 TRMT6Q9UJA5 497 aaKnown RBP17.13■□□□□ 0.33
ATXN2-219ENST00000550104 VPS28Q9UK41 221 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 PACSIN3Q9UKS6 424 aa17.13■□□□□ 0.33
ATXN2-219ENST00000550104 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 DNAJC6O75061 913 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 RTN3O95197 1032 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-219ENST00000550104 BRMS1LQ5PSV4 323 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 TTC7BQ86TV6 843 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 IFNLR1Q8IU57 520 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-219ENST00000550104 TMEM40Q8WWA1 233 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 AGAP2Q99490 1192 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 GBA3Q9H227 469 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 FBXO5Q9UKT4 447 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 BAG5Q9UL15 447 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 RAD54BQ9Y620 910 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 GRK4P32298 578 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 RPL14P50914 215 aaKnown RBP17.12■□□□□ 0.33
ATXN2-219ENST00000550104 WASHC5Q12768 1159 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 NAIF1Q69YI7 327 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-219ENST00000550104 IZUMO2Q6UXV1 221 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 EME1Q96AY2 570 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 MARK4Q96L34 752 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 APOL5Q9BWW9 433 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 USP29Q9HBJ7 922 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 XPR1Q9UBH6 696 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 HOXA2O43364 376 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 SP3Q02447 781 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 STX5Q13190 355 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 CRHR2Q13324 411 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 GDF6Q6KF10 455 aaPredicted RBP17.12■□□□□ 0.33
ATXN2-219ENST00000550104 MON1AQ86VX9 555 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 PCYOX1LQ8NBM8 494 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 C10orf82Q8WW14 230 aa17.12■□□□□ 0.33
ATXN2-219ENST00000550104 UPF1Q92900 1129 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATXN2-219ENST00000550104 CRTAMO95727 393 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 HMOX2P30519 316 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 AGKQ53H12 422 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 EFCAB3Q8N7B9 438 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 TRIML2Q8N7C3 387 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 KYQ8NBH2 561 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 SH3BP1Q9Y3L3 701 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 CDK5RAP2Q96SN8 1893 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 CKMP06732 381 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 CCDC166P0CW27 439 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 CXorf38Q8TB03 319 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 EMID1Q96A84 441 aaPredicted RBP17.11■□□□□ 0.33
ATXN2-219ENST00000550104 SEMA3CQ99985 751 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 POLR1EQ9GZS1 481 aaKnown RBP17.11■□□□□ 0.33
ATXN2-219ENST00000550104 SLC8A2Q9UPR5 921 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 ZNF831Q5JPB2 1677 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 GPR32O75388 356 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 PSMG1O95456 288 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 SCNN1AP37088 669 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 PURAQ00577 322 aaKnown RBP17.11■□□□□ 0.33
ATXN2-219ENST00000550104 DSG1Q02413 1049 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 RAD51Q06609 339 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 MAMDC4Q6UXC1 1216 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 HMX1Q9NP08 348 aaPredicted RBP17.11■□□□□ 0.33
ATXN2-219ENST00000550104 ANLNQ9NQW6 1124 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 TMEM216Q9P0N5 145 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 COPG2Q9UBF2 871 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 MRPS35P82673 323 aaKnown RBP17.11■□□□□ 0.33
ATXN2-219ENST00000550104 UBR7Q8N806 425 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 FAR2Q96K12 515 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 ZNF395Q9H8N7 513 aaPredicted RBP17.11■□□□□ 0.33
ATXN2-219ENST00000550104 GTF2IRD1Q9UHL9 959 aa17.11■□□□□ 0.33
ATXN2-219ENST00000550104 MGRN1O60291 552 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 PLIN3O60664 434 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 CABYRO75952 493 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 BEST1O76090 585 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 SERPINA6P08185 405 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 ZCCHC18P0CG32 403 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 ACADSP16219 412 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 EPHA3P29320 983 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 PTDSS1P48651 473 aaKnown RBP17.1■□□□□ 0.33
ATXN2-219ENST00000550104 KPNA1P52294 538 aaPredicted RBP17.1■□□□□ 0.33
ATXN2-219ENST00000550104 DLG2Q15700 870 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 LRRC74BQ6ZQY2 392 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 C16orf59Q7L2K0 433 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 NCLNQ969V3 563 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 C7orf26Q96N11 449 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 VCX3AQ9NNX9 186 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms