RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 CD19P15391 556 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 CCKBRP32239 447 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 CHRNA3P32297 505 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 ETV5P41161 510 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 NUCB2P80303 420 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 NNTQ13423 1086 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 PDE1CQ14123 709 aaPredicted RBP9.13□□□□□ -0.95
UBE2N-203ENST00000549490 PRRT3Q5FWE3 981 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 PMF1Q6P1K2 205 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 ERN2Q76MJ5 926 aaKnown RBP9.13□□□□□ -0.95
UBE2N-203ENST00000549490 SH2D3CQ8N5H7 860 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 TMIEQ8NEW7 156 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 OR52K2Q8NGK3 314 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 OR2A12Q8NGT7 310 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 SLC35F5Q8WV83 523 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 BTN2A2Q8WVV5 523 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 EEF2KMTQ96G04 330 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 TMEM74Q96NL1 305 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 SERPINB11Q96P15 392 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 KLF6Q99612 283 aaPredicted RBP9.13□□□□□ -0.95
UBE2N-203ENST00000549490 FEM1AQ9BSK4 669 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 HDAC8Q9BY41 377 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 CLPBQ9H078 707 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 GULP1Q9UBP9 304 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 SLC25A13Q9UJS0 675 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 TUBD1Q9UJT1 453 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 PNMA8BQ9ULN7 279 aaPredicted RBP9.13□□□□□ -0.95
UBE2N-203ENST00000549490 NAALADL1Q9UQQ1 740 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 OR51B4Q9Y5P0 310 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 ICE1Q9Y2F5 2266 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 FBN2P35556 2912 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 RP1P56715 2156 aa9.13□□□□□ -0.95
UBE2N-203ENST00000549490 DOCK9Q9BZ29 2069 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 A0A1W2PQ27 194 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 A0A1W2PQ64 194 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 A0A1W2PQC6 194 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 A0A1W2PQM1 296 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 C9orf172C9J069 976 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 POLR2DO15514 142 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 KLRC4O43908 158 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 MT-CO1P00395 513 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 RPLP0P05388 317 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 ANXA6P08133 673 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 NASPP49321 788 aaPredicted RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 OXCT1P55809 520 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 PFN3P60673 137 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 RPS21P63220 83 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 KRT39Q6A163 491 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 ESRP1Q6NXG1 681 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 SHC4Q6S5L8 630 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 INTS8Q75QN2 995 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 TAC4Q86UU9 113 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 GRAMD1CQ8IYS0 662 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 SDR16C5Q8N3Y7 309 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 CHST14Q8NCH0 376 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 LINC00301Q8NCQ3 95 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 USP7Q93009 1102 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 CCDC74AQ96AQ1 378 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 MIB2Q96AX9 1013 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 FEM1CQ96JP0 617 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 PRMT1Q99873 361 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 LRRC61Q9BV99 259 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 SRRTQ9BXP5 876 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 CPEB1Q9BZB8 566 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 MAGEF1Q9HAY2 307 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 ZNF71Q9NQZ8 489 aaPredicted RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 DYRK4Q9NR20 520 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 RAB20Q9NX57 234 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 APOBEC3BQ9UH17 382 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 SRPK3Q9UPE1 567 aa9.12□□□□□ -0.95
UBE2N-203ENST00000549490 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 TDRD6O60522 2096 aaKnown RBP9.12□□□□□ -0.95
UBE2N-203ENST00000549490 SPENQ96T58 3664 aaKnown RBP9.11□□□□□ -0.95
UBE2N-203ENST00000549490 TCAF2A6NFQ2 919 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.11□□□□□ -0.95
UBE2N-203ENST00000549490 F5H5T6 163 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 K7ERQ8 282 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 FPGTO14772 594 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 KRT38O76015 456 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 APOEP02649 317 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 PRNPP04156 253 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 CELA2BP08218 269 aaPredicted RBP9.11□□□□□ -0.95
UBE2N-203ENST00000549490 VDRP11473 427 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 SRCP12931 536 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 KRT13P13646 458 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 TSHRP16473 764 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 GTF2H1P32780 548 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 MAPK10P53779 464 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 ENPEPQ07075 957 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 ZFP36L1Q07352 338 aaKnown RBP9.11□□□□□ -0.95
UBE2N-203ENST00000549490 STK38Q15208 465 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 ARSIQ5FYB1 569 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 SYPL2Q5VXT5 272 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 KIAA1161Q6NSJ0 714 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 LCLAT1Q6UWP7 414 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 FAM186BQ8IYM0 893 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 PHACTR4Q8IZ21 702 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 KYQ8NBH2 561 aa9.11□□□□□ -0.95
UBE2N-203ENST00000549490 FBXL13Q8NEE6 735 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms