RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 MAP6D1Q9H9H5 199 aa4.48□□□□□ -1.69
DEPDC4-205ENST00000548313 TBC1D14Q9P2M4 693 aa4.48□□□□□ -1.69
DEPDC4-205ENST00000548313 PGAP2Q9UHJ9 254 aa4.48□□□□□ -1.69
DEPDC4-205ENST00000548313 SLC13A4Q9UKG4 626 aa4.48□□□□□ -1.69
DEPDC4-205ENST00000548313 GOLGA6L10A0A0M3HER8 536 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 CCDC196A0A1B0GTZ2 297 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 FAM90A7PA6NKC0 464 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 FAM90A22PA8MWA6 464 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 FAM90A12PA8MX19 464 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 FAM90A23PA8MXZ1 464 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 HOXC11O43248 304 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 SERPINC1P01008 464 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 IGKV2-30P06310 120 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 YWHAQP27348 245 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 TRPC3Q13507 836 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 RPE65Q16518 533 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 SLC18A3Q16572 532 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 SYTL3Q4VX76 610 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 RETSATQ6NUM9 610 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 LRRC8DQ7L1W4 858 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 GPSM1Q86YR5 675 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 NOC3LQ8WTT2 800 aaKnown RBP4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 ATP8A2Q9NTI2 1148 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 ALKBH4Q9NXW9 302 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 SAGE1Q9NXZ1 904 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 PDP2Q9P2J9 529 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 HDAC6Q9UBN7 1215 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 SEL1LQ9UBV2 794 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 GTF2A1LQ9UNN4 478 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 CNPY2Q9Y2B0 182 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 RAP2CQ9Y3L5 183 aa4.47□□□□□ -1.69
DEPDC4-205ENST00000548313 TARSL2A2RTX5 802 aaKnown RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 RRN3P2A6NIE6 340 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 FAM157AC9JC47 383 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 NPHP1O15259 732 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 CBX6O95503 412 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 IL1AP01583 271 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 MMP3P08254 477 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 IFIT1P09914 478 aaKnown RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 ENO3P13929 434 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 PGM1P36871 562 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 DPP6P42658 865 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 PRTGQ2VWP7 1150 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 WASHC2DQ5SRD0 308 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 TBC1D9BQ66K14 1250 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 NUGGCQ68CJ6 796 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 SLC16A12Q6ZSM3 486 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 SERPINA11Q86U17 422 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 GHDCQ8N2G8 530 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 TMEM199Q8N511 208 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 LRRC57Q8N9N7 239 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 C9orf106Q8NAJ2 232 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 LSM14AQ8ND56 463 aaKnown RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 ZMIZ2Q8NF64 920 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 RFWD2Q8NHY2 731 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 GABPB2Q8TAK5 448 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 HSPH1Q92598 858 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 CNOT9Q92600 299 aaKnown RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 WDR77Q9BQA1 342 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 GPR63Q9BZJ6 419 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 ENTPD7Q9NQZ7 604 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 SIRT3Q9NTG7 399 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 CNOT7Q9UIV1 285 aaKnown RBP4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 CDH22Q9UJ99 828 aa4.46□□□□□ -1.7
DEPDC4-205ENST00000548313 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 FAM90A10PA6NDY2 464 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 B4DGG1 531 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 H3BNX3 289 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 HSPB6O14558 160 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 SPTLC2O15270 562 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 CREB3O43889 395 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 OAZ2O95190 189 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 CRYABP02511 175 aaKnown RBP4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 POLBP06746 335 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 XBP1P17861 261 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 SCP2P22307 547 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 CNTFP26441 200 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 GPR12P47775 334 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 KCNJ4P48050 445 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 CCT4P50991 539 aaKnown RBP4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 NAA25Q14CX7 972 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 AWAT2Q6E213 333 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 NAPEPLDQ6IQ20 393 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 HEPHL1Q6MZM0 1159 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 ZNF366Q8N895 744 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 Q8N9P0 234 aaPredicted RBP4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 TNIP2Q8NFZ5 429 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 TMEM163Q8TC26 289 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 NSMCE1Q8WV22 266 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 RAB40AQ8WXH6 277 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 INPP5DQ92835 1189 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 CLSTN3Q9BQT9 956 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 KRTAP1-5Q9BYS1 174 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 FAM234AQ9H0X4 552 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 ISCUQ9H1K1 167 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 WASH6PQ9NQA3 447 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 NLKQ9UBE8 527 aa4.45□□□□□ -1.7
DEPDC4-205ENST00000548313 SQORQ9Y6N5 450 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms