RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ZC3H18Q86VM9 953 aaKnown RBP17.76■□□□□ 0.43
HDAC7-227ENST00000548080 CCDC117Q8IWD4 279 aaPredicted RBP17.76■□□□□ 0.43
HDAC7-227ENST00000548080 TBC1D31Q96DN5 1066 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 TMEM121Q9BTD3 319 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 TRIM31Q9BZY9 425 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 DPH5Q9H2P9 285 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 ELOVL2Q9NXB9 296 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 MFHAS1Q9Y4C4 1052 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 RAD54BQ9Y620 910 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 CACNA1HO95180 2353 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 CHURC1-FNTBB4DL54 471 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 KRT14P02533 472 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CTSOP43234 321 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CARSP49589 748 aaKnown RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CCR3P51677 355 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 MRPS21P82921 87 aaKnown RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 KCTD19Q17RG1 926 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 PITRM1Q5JRX3 1037 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 TMEM92Q6UXU6 159 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 NUDT18Q6ZVK8 323 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CHPFQ8IZ52 775 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 ZNF366Q8N895 744 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 EIF1ADQ8N9N8 165 aaKnown RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 HNRNPLLQ8WVV9 542 aaKnown RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 PRMT8Q9NR22 394 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 DTLQ9NZJ0 730 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 ASIC3Q9UHC3 531 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 MMP17Q9ULZ9 603 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 SLC8A2Q9UPR5 921 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 NEU3Q9UQ49 428 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 MUC22E2RYF6 1773 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CFAP69A5D8W1 941 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 DRGXA6NNA5 263 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 K7ESF4 209 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 FGF10O15520 208 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 MFSD11O43934 449 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 SP9P0CG40 484 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 HLA-EP13747 358 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 STIP1P31948 543 aaKnown RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CLCN6P51797 869 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 ZNF177Q13360 481 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 ZNF234Q14588 700 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 TRIP13Q15645 432 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 C5orf22Q49AR2 442 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 MAP9Q49MG5 647 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 TTC39BQ5VTQ0 682 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 RNF219Q5W0B1 726 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 KIAA0907Q7Z7F0 614 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CDKL3Q8IVW4 592 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-227ENST00000548080 AHI1Q8N157 1196 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CCDC89Q8N998 374 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CCHCR1Q8TD31 782 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 ACDQ96AP0 544 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 OLFM3Q96PB7 478 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 CATSPERBQ9H7T0 1116 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 C10orf88Q9H8K7 445 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 NFU1Q9UMS0 254 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 SNX24Q9Y343 169 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 STARD13Q9Y3M8 1113 aa17.75■□□□□ 0.43
HDAC7-227ENST00000548080 IGLV3-10A0A075B6K4 115 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 BCLAF3A2AJT9 711 aaKnown RBP17.74■□□□□ 0.43
HDAC7-227ENST00000548080 HACD1B0YJ81 288 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 ATG13O75143 517 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 CLDN11O75508 207 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 MAP3K6O95382 1288 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 RHOCP08134 193 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 MYBL2P10244 700 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 POLR2EP19388 210 aaKnown RBP17.74■□□□□ 0.43
HDAC7-227ENST00000548080 IL12RB1P42701 662 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 CDH4P55283 916 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 PLEKHG6Q3KR16 790 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 FNDC3BQ53EP0 1204 aaKnown RBP17.74■□□□□ 0.43
HDAC7-227ENST00000548080 WFIKKN2Q8TEU8 576 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.74■□□□□ 0.43
HDAC7-227ENST00000548080 IER2Q9BTL4 223 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 ZYG11BQ9C0D3 744 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 NDFIP2Q9NV92 336 aa17.74■□□□□ 0.43
HDAC7-227ENST00000548080 KIAA1522Q9P206 1035 aaPredicted RBP17.74■□□□□ 0.43
HDAC7-227ENST00000548080 PPARGC1AQ9UBK2 798 aaKnown RBP17.74■□□□□ 0.43
HDAC7-227ENST00000548080 TDGF1P13385 188 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 HOXB2P14652 356 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 NTSR1P30989 418 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 SERPINB6P35237 376 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 ADCY8P40145 1251 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 RPL21P46778 160 aaKnown RBP17.73■□□□□ 0.43
HDAC7-227ENST00000548080 FNTBP49356 437 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 STK19P49842 368 aaPredicted RBP17.73■□□□□ 0.43
HDAC7-227ENST00000548080 HLTFQ14527 1009 aaKnown RBP eCLIP17.73■□□□□ 0.43
HDAC7-227ENST00000548080 PDK1Q15118 436 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 SLC45A4Q5BKX6 768 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 KIAA1211LQ6NV74 962 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 SYT13Q7L8C5 426 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 FAM71DQ8N9W8 422 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 UCMAQ8WVF2 138 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 QKIQ96PU8 341 aaKnown RBP eCLIP17.73■□□□□ 0.43
HDAC7-227ENST00000548080 MUC3BQ9H195 1237 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 MTG2Q9H4K7 406 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 USP29Q9HBJ7 922 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms