RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CHST14Q8NCH0 376 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 PIP4K2CQ8TBX8 421 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 CELF6Q96J87 481 aaKnown RBP19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 CCDC114Q96M63 670 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 C6orf106Q9H6K1 298 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 LRRC19Q9H756 370 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 LCMT1Q9UIC8 334 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 INTUQ9ULD6 942 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 ZSCAN5CA6NGD5 496 aaPredicted RBP19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 MEI4A8MW99 385 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 H3BRJ5 948 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 BUB1O43683 1085 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 LCA5LO95447 670 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 CTSLP07711 333 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 MAOBP27338 520 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 DRD3P35462 400 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 ARL4AP40617 200 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 DPP6P42658 865 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 RECQLP46063 649 aaPredicted RBP19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 DNA2P51530 1060 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 WDR45BQ5MNZ6 344 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 SYCP2LQ5T4T6 812 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 DCAF12L1Q5VU92 463 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 DPY19L3Q6ZPD9 716 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 RHOT2Q8IXI1 618 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 CCDC170Q8IYT3 715 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 RGL4Q8IZJ4 473 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 C12orf50Q8NA57 414 aaPredicted RBP19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 ISG20Q96AZ6 181 aaKnown RBP19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 SLC39A8Q9C0K1 460 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 PCED1AQ9H1Q7 454 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 PCDH18Q9HCL0 1135 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 RXFP3Q9NSD7 469 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 FZD4Q9ULV1 537 aa19.09■□□□□ 0.65
PRPF40B-206ENST00000547764 TMEM110-MUSTN1A8MSY1 372 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 C1QTNF3-AMACRE9PGA6 284 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 PLK4O00444 970 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 KHNYNO15037 678 aaKnown RBP19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 GDF9O60383 454 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 MTA2O94776 668 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 FECHP22830 423 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 AMPD1P23109 780 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 MAN1A1P33908 653 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 HOXD12P35452 270 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 MAGEA1P43355 309 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 TAS2R40P59535 323 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 MESDQ14696 234 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 POM121L1PQ3SYA9 428 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 ATP13A4Q4VNC1 1196 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 CARD16Q5EG05 197 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 AFMIDQ63HM1 303 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 ARHGAP12Q8IWW6 846 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 NPWQ8N729 165 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 NETO2Q8NC67 525 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 TMIEQ8NEW7 156 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 RFFLQ8WZ73 363 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 DNASE2BQ8WZ79 361 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 CSPG4P5Q96PW8 444 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 TM6SF2Q9BZW4 377 aa19.08■□□□□ 0.64
PRPF40B-206ENST00000547764 DMXL1Q9Y485 3027 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 FAM47DPA6NHR8 397 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 PRR5-ARHGAP8B1AHC4 643 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 RNF103O00237 685 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 PRNPP04156 253 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 CDC25BP30305 580 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 CYLC1P35663 651 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 GJC1P36383 396 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 ARHGAP25P42331 645 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 PAPOLAP51003 745 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 CDH6P55285 790 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 IRX4P78413 519 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 ARHGAP8P85298 464 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 KRT81Q14533 505 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 AASDHQ4L235 1098 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 TRIM61Q5EBN2 209 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 ARSIQ5FYB1 569 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 PLPP6Q8IY26 295 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 FAM71BQ8TC56 605 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 GRIN3AQ8TCU5 1115 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 TSC1Q92574 1164 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 FAM131CQ96AQ9 280 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 IL36AQ9UHA7 158 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 EVLQ9UI08 416 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 MFHAS1Q9Y4C4 1052 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 CEP250Q9BV73 2442 aa19.07■□□□□ 0.64
PRPF40B-206ENST00000547764 PI4KAP42356 2102 aa19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 ARHGAP42A6NI28 874 aa19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 SOWAHDA6NJG2 315 aa19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 J3KR12 359 aa19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 KPNA3O00505 521 aaPredicted RBP19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 TMCC1O94876 653 aa19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 CD48P09326 243 aa19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 IL4RP24394 825 aa19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 ARSEP51690 589 aa19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 CCNHP51946 323 aaPredicted RBP19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 ADPRHP54922 357 aa19.06■□□□□ 0.64
PRPF40B-206ENST00000547764 CNTN1Q12860 1018 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms