RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ARIH1Q9Y4X5 557 aaPredicted RBP13.67□□□□□ -0.22
PTCH1-215ENST00000547672 RPS6KL1Q9Y6S9 549 aa13.67□□□□□ -0.22
PTCH1-215ENST00000547672 KIAA1671Q9BY89 1806 aa13.67□□□□□ -0.22
PTCH1-215ENST00000547672 E2F8A0AVK6 867 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 TMEM120BA0PK00 339 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 H0Y626 953 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 TM9SF1O15321 606 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 SPATA31D3P0C874 917 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 CA4P22748 312 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 ADRA1DP25100 572 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 GCAP28676 217 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 POLD2P49005 469 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 CLCN4P51793 760 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 EPHA5P54756 1037 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 ERVFC1P60507 584 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 GUCY1A3Q02108 690 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 SLC12A1Q13621 1099 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 CRYMQ14894 314 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 GRTP1Q5TC63 336 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 PLPP4Q5VZY2 271 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 RANBP10Q6VN20 620 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 SPATA31D4Q6ZUB0 917 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 MARK2Q7KZI7 788 aaKnown RBP13.66□□□□□ -0.22
PTCH1-215ENST00000547672 OTOP3Q7RTS5 596 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 TMEM150AQ86TG1 271 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 FAM217AQ8IXS0 508 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 ARL14EPQ8N8R7 260 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-215ENST00000547672 NETO2Q8NC67 525 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 ACMSDQ8TDX5 336 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 ATP2A3Q93084 1043 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 CPNE1Q99829 537 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 CORO1BQ9BR76 489 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 SPON2Q9BUD6 331 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 MLPHQ9BV36 600 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-215ENST00000547672 KIFC1Q9BW19 673 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 ZNF334Q9HCZ1 680 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-215ENST00000547672 ALG13Q9NP73 1137 aaKnown RBP13.66□□□□□ -0.22
PTCH1-215ENST00000547672 NT5MQ9NPB1 228 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 UBA2Q9UBT2 640 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-215ENST00000547672 CPQQ9Y646 472 aa13.66□□□□□ -0.22
PTCH1-215ENST00000547672 MYO18AQ92614 2054 aaKnown RBP13.66□□□□□ -0.22
PTCH1-215ENST00000547672 HEATR9A2RTY3 570 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 J3KR12 359 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 PEX11BO96011 259 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 KLKB1P03952 638 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 HLA-DQB2P05538 268 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 SERPINF2P08697 491 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 IRF1P10914 325 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 MYL4P12829 197 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 SLC6A4P31645 630 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 AVPR1AP37288 418 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 GRIA1P42261 906 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 WNT3AP56704 352 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 SLC20A2Q08357 652 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 SPARCL1Q14515 664 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 UGP2Q16851 508 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 ANKRD20A4Q4UJ75 823 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 INO80DQ53TQ3 878 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-215ENST00000547672 UBAP2Q5T6F2 1119 aaKnown RBP13.65□□□□□ -0.22
PTCH1-215ENST00000547672 PDPK2PQ6A1A2 396 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 TXNDC8Q6A555 127 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 PKN3Q6P5Z2 889 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 RFWD3Q6PCD5 774 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 Q6ZNB5 142 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 TIFABQ6ZNK6 161 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 ARHGAP36Q6ZRI8 547 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 TMC8Q8IU68 726 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 CYP4X1Q8N118 509 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 CFAP52Q8N1V2 620 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 MAB21L3Q8N8X9 362 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 IPMKQ8NFU5 416 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 CALML6Q8TD86 181 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 BCAS4Q8TDM0 211 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 ARNTL2Q8WYA1 636 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 USP13Q92995 863 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-215ENST00000547672 IFT43Q96FT9 208 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 RANBP9Q96S59 729 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 WDR83Q9BRX9 315 aaKnown RBP13.65□□□□□ -0.22
PTCH1-215ENST00000547672 CINPQ9BW66 212 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-215ENST00000547672 LRRC3Q9BY71 257 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 ACE2Q9BYF1 805 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-215ENST00000547672 IQCGQ9H095 443 aaKnown RBP13.65□□□□□ -0.22
PTCH1-215ENST00000547672 MUC3BQ9H195 1237 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 TASP1Q9H6P5 420 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 ATP13A1Q9HD20 1204 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 SYBUQ9NX95 663 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 ZFATQ9P243 1243 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 TBC1D14Q9P2M4 693 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 ARHGAP26Q9UNA1 814 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 SHROOM3Q8TF72 1996 aa13.65□□□□□ -0.22
PTCH1-215ENST00000547672 PTPRSQ13332 1948 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 H3BNC9 293 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 NDUFAB1O14561 156 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 SLC9A3R1O14745 358 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 TBL1XO60907 577 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 PMPCBO75439 489 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 FAM107AO95990 144 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 ALADP13716 330 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 SYN1P17600 705 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms