RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 FTSJ1Q9UET6 329 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 OR12D3Q9UGF7 316 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 DMTF1Q9Y222 760 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 WASF2Q9Y6W5 498 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 CHD6Q8TD26 2715 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 PLXNB3Q9ULL4 1909 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 SLC31A1O15431 190 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 LEFTY1O75610 366 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 LDOC1O95751 146 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-204ENST00000547486 PRLRP16471 622 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 EPHA8P29322 1005 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-204ENST00000547486 RFC1P35251 1148 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-204ENST00000547486 ARRB1P49407 418 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-204ENST00000547486 SERPINH1P50454 418 aaKnown RBP13.63□□□□□ -0.23
CPSF6-204ENST00000547486 CLCN6P51797 869 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 HDAC4P56524 1084 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 GNA12Q03113 381 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 DNAJC3Q13217 504 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 CAMK2BQ13554 666 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 STAT4Q14765 748 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 NCAPHQ15003 741 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 SMAD1Q15797 465 aaKnown RBP13.63□□□□□ -0.23
CPSF6-204ENST00000547486 ZNF284Q2VY69 593 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 SLC45A4Q5BKX6 768 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 MANEALQ5VSG8 457 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 IQCHQ86VS3 1027 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 NLRP14Q86W24 1093 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 CCDC185Q8N715 623 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 GRIN3AQ8TCU5 1115 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 OSBPL2Q9H1P3 480 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 PREBQ9HCU5 417 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 IL36AQ9UHA7 158 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 ZFR2Q9UPR6 939 aaKnown RBP13.63□□□□□ -0.23
CPSF6-204ENST00000547486 NEU3Q9UQ49 428 aa13.63□□□□□ -0.23
CPSF6-204ENST00000547486 FCF1Q9Y324 198 aaKnown RBP13.63□□□□□ -0.23
CPSF6-204ENST00000547486 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-204ENST00000547486 LGALS16A8MUM7 142 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 PRAMEF26H0Y7S4 382 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 ENC1O14682 589 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 PRNPP04156 253 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 TPM2P07951 284 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 KRT3P12035 628 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 SDC4P31431 198 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 NUDT1P36639 197 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 ANP32AP39687 249 aaKnown RBP13.62□□□□□ -0.23
CPSF6-204ENST00000547486 PTPN9P43378 593 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 DNA2P51530 1060 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 CLDN6P56747 220 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 NRG1Q02297 640 aaPredicted RBP13.62□□□□□ -0.23
CPSF6-204ENST00000547486 SLC20A2Q08357 652 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 CLEC16AQ2KHT3 1053 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 SETMARQ53H47 684 aaPredicted RBP13.62□□□□□ -0.23
CPSF6-204ENST00000547486 CARD16Q5EG05 197 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 SFMBT2Q5VUG0 894 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 RETSATQ6NUM9 610 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 RWDD4Q6NW29 188 aaKnown RBP13.62□□□□□ -0.23
CPSF6-204ENST00000547486 SASS6Q6UVJ0 657 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 TRIM72Q6ZMU5 477 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 ERN2Q76MJ5 926 aaKnown RBP13.62□□□□□ -0.23
CPSF6-204ENST00000547486 HORMAD1Q86X24 394 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 TMEM145Q8NBT3 493 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 TSC1Q92574 1164 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 VOPP1Q96AW1 172 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 CNDP2Q96KP4 475 aaKnown RBP13.62□□□□□ -0.23
CPSF6-204ENST00000547486 CCDC114Q96M63 670 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 MYOCQ99972 504 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 HDAC8Q9BY41 377 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 CCDC86Q9H6F5 360 aaKnown RBP13.62□□□□□ -0.23
CPSF6-204ENST00000547486 FZD3Q9NPG1 666 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 ADAM22Q9P0K1 906 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 DNAI1Q9UI46 699 aa13.62□□□□□ -0.23
CPSF6-204ENST00000547486 TCRBV5S1A1TA0A578 114 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 TRABD2BA6NFA1 517 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 SDC3O75056 442 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 LRIG2O94898 1065 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 PLEKP08567 350 aaPredicted RBP13.61□□□□□ -0.23
CPSF6-204ENST00000547486 GKP32189 559 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 RECQLP46063 649 aaPredicted RBP13.61□□□□□ -0.23
CPSF6-204ENST00000547486 CLDN2P57739 230 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 MYL5Q02045 173 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 UBXN1Q04323 297 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 OVGP1Q12889 678 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 INAVAQ3KP66 663 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 ARL13BQ3SXY8 428 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 SEL1L3Q68CR1 1132 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 NEK5Q6P3R8 708 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 WDR59Q6PJI9 974 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 LEKR1Q6ZMV7 388 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 STRADAQ7RTN6 431 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 PHF13Q86YI8 300 aaPredicted RBP13.61□□□□□ -0.23
CPSF6-204ENST00000547486 GALNT15Q8N3T1 639 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 SLC25A45Q8N413 288 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 NEK11Q8NG66 645 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 FAM172AQ8WUF8 416 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 ARHGEF2Q92974 986 aaKnown RBP13.61□□□□□ -0.23
CPSF6-204ENST00000547486 KLHDC7BQ96G42 594 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 PCMTD1Q96MG8 357 aaPredicted RBP13.61□□□□□ -0.23
CPSF6-204ENST00000547486 ERGIC2Q96RQ1 377 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 HEPHQ9BQS7 1158 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms