RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PARP6Q2NL67 630 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 DUPD1Q68J44 220 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 ADIPOR2Q86V24 386 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 ZNF567Q8N184 647 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 TERB1Q8NA31 727 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 TTC8Q8TAM2 541 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 CCDC110Q8TBZ0 833 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 LRRN4Q8WUT4 740 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 SNF8Q96H20 258 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 P2RY13Q9BPV8 354 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 TRIM51Q9BSJ1 452 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 PRDM6Q9NQX0 595 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 FAM114A2Q9NRY5 505 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 HS3ST2Q9Y278 367 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 REV3LO60673 3130 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 TBC1D3BA6NDS4 549 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 SPECC1L-ADORA2AF8WAN1 911 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 PSMD3O43242 534 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 KAT7O95251 611 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 ASGR2P07307 311 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 DLDP09622 509 aaKnown RBP16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 ITIH2P19823 946 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 GLDCP23378 1020 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 SLC6A11P48066 632 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 ST8SIA6P61647 398 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 SLC7A5Q01650 507 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 CAV1Q03135 178 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 ZP2Q05996 745 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 KDSRQ06136 332 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 SLC10A7Q0GE19 358 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 CUL1Q13616 776 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 ERCC6LQ2NKX8 1250 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 RALGPS1Q5JS13 557 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 KDM1BQ8NB78 822 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 USP33Q8TEY7 942 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 SEC14L1Q92503 715 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 ISG20Q96AZ6 181 aaKnown RBP16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 AGAP3Q96P47 875 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 PSKH2Q96QS6 385 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 CIPCQ9C0C6 399 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 CEP44Q9C0F1 390 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 POLR1EQ9GZS1 481 aaKnown RBP16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 GBA3Q9H227 469 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 ELOVL2Q9NXB9 296 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 WHRNQ9P202 907 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 RSPH14Q9UHP6 348 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 DMGDHQ9UI17 866 aaKnown RBP16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 PLA2G4CQ9UP65 541 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 ATP8A1Q9Y2Q0 1164 aa16.11■□□□□ 0.17
TRAFD1-203ENST00000547063 ERI2A8K979 691 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 E7EVH7 732 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 NPC1O15118 1278 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 ZBTB24O43167 697 aaPredicted RBP16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 ANXA9O76027 345 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 TMCC1O94876 653 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 ZSCAN5DPP0CG00 497 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 ETS1P14921 441 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 CTHP32929 405 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 VPS41P49754 854 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 RHOAP61586 193 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 ITKQ08881 620 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 NSUN2Q08J23 767 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 GEN1Q17RS7 908 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 LINGO4Q6UY18 593 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 PHTF2Q8N3S3 785 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 EIF1ADQ8N9N8 165 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 ATP11CQ8NB49 1132 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 GLIS1Q8NBF1 620 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 FCRL5Q96RD9 977 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 TRIM31Q9BZY9 425 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 GLOD4Q9HC38 313 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 EPB41L5Q9HCM4 733 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 NT5MQ9NPB1 228 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 RAB6BQ9NRW1 208 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 TPX2Q9ULW0 747 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 SORCS3Q9UPU3 1222 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 ERVW-1Q9UQF0 538 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 AAR2Q9Y312 384 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 TTLL3Q9Y4R7 772 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 PIAS3Q9Y6X2 628 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 COL4A3Q01955 1670 aa16.1■□□□□ 0.17
TRAFD1-203ENST00000547063 MYO10Q9HD67 2058 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 DNALI1O14645 258 aaPredicted RBP16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 CTIFO43310 598 aaKnown RBP16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 HLA-DQB2P05538 268 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 TNFRSF4P43489 277 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 MAPK8P45983 427 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 BASP1P80723 227 aaKnown RBP16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 MRPS25P82663 173 aaKnown RBP16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 CDK16Q00536 496 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 SLC14A2Q15849 920 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 ALG1LQ6GMV1 187 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 LEKR1Q6ZMV7 388 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 HOOK3Q86VS8 718 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 PPIL6Q8IXY8 311 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 SH2D3CQ8N5H7 860 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 PCDH20Q8N6Y1 951 aaKnown RBP16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 CNTD1Q8N815 330 aa16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRAFD1-203ENST00000547063 MGME1Q9BQP7 344 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms