RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PCDHA3Q9Y5H8 950 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 CCDC66A2RUB6 948 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 J3KR12 359 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 ZNF821O75541 412 aaPredicted RBP17.12■□□□□ 0.33
CCDC38-203ENST00000546803 PALMO75781 387 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 TMCC1O94876 653 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 ADH1BP00325 375 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 C5AR1P21730 350 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 CTNNA2P26232 953 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 TPMTP51580 245 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 SRSF5Q13243 272 aaKnown RBP17.12■□□□□ 0.33
CCDC38-203ENST00000546803 CST6Q15828 149 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 TAZQ16635 292 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 CARD16Q5EG05 197 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 PEX26Q7Z412 305 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 MMAAQ8IVH4 418 aaKnown RBP17.12■□□□□ 0.33
CCDC38-203ENST00000546803 EXD1Q8NHP7 514 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 RLN3Q8WXF3 142 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 RBM41Q96IZ5 413 aaKnown RBP17.12■□□□□ 0.33
CCDC38-203ENST00000546803 ZNF599Q96NL3 588 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 PABPC3Q9H361 631 aaKnown RBP17.12■□□□□ 0.33
CCDC38-203ENST00000546803 AMFRQ9UKV5 643 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 PPM1HQ9ULR3 514 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 GUCA1BQ9UMX6 200 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 ACTL7AQ9Y615 435 aa17.12■□□□□ 0.33
CCDC38-203ENST00000546803 MUC22E2RYF6 1773 aaPredicted RBP17.11■□□□□ 0.33
CCDC38-203ENST00000546803 IGHV1OR15-9A0A0B4J2B8 117 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 C1QTNF3-AMACRE9PGA6 284 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 BNIP3LO60238 219 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 GSRP00390 522 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 IL1BP01584 269 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 LMNAP02545 664 aaKnown RBP17.11■□□□□ 0.33
CCDC38-203ENST00000546803 MX2P20592 715 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 CHRNA3P32297 505 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 SLC8A1P32418 973 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 CDKN2BP42772 138 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 DNA2P51530 1060 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 SNRPD1P62314 119 aaKnown RBP17.11■□□□□ 0.33
CCDC38-203ENST00000546803 GALNT2Q10471 571 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 TFDP2Q14188 446 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 ELF2Q15723 593 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 SPDYCQ5MJ68 293 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 TMCO4Q5TGY1 634 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 SLC9A4Q6AI14 798 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 MFSD7Q6UXD7 560 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 LEKR1Q6ZMV7 388 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 DPY19L3Q6ZPD9 716 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 PRR23BQ6ZRT6 265 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 USP30Q70CQ3 517 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 NT5DC3Q86UY8 548 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 ATPAF2Q8N5M1 289 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 TMIEQ8NEW7 156 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 KRT35Q92764 455 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 ZC3H10Q96K80 434 aaKnown RBP17.11■□□□□ 0.33
CCDC38-203ENST00000546803 TNKS2Q9H2K2 1166 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 CYP8B1Q9UNU6 501 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 INVSQ9Y283 1065 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 NCKAP1Q9Y2A7 1128 aa17.11■□□□□ 0.33
CCDC38-203ENST00000546803 MIF4GDA9UHW6 222 aaKnown RBP17.1■□□□□ 0.33
CCDC38-203ENST00000546803 APOL1O14791 398 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 MAP3K13O43283 966 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 MFSD11O43934 449 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 RHOBTB1O94844 696 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 PRNPP04156 253 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 CD6P30203 668 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 PSMD8P48556 350 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 RWDD2BP57060 319 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 COPS2P61201 443 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 CYTH1Q15438 398 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 PLK5Q496M5 336 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 SPOCD1Q6ZMY3 1216 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 KBTBD6Q86V97 674 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 CACUL1Q86Y37 369 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 TP53INP2Q8IXH6 220 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 SUMF1Q8NBK3 374 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 NETO2Q8NC67 525 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 OR2AP1Q8NGE2 309 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 NSMCE1Q8WV22 266 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 LRIG1Q96JA1 1093 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 GDAP1L1Q96MZ0 367 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 ZNF830Q96NB3 372 aaPredicted RBP17.1■□□□□ 0.33
CCDC38-203ENST00000546803 HEPHQ9BQS7 1158 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 TM6SF2Q9BZW4 377 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 HECAQ9UBI9 543 aaPredicted RBP17.1■□□□□ 0.33
CCDC38-203ENST00000546803 SMG5Q9UPR3 1016 aaKnown RBP17.1■□□□□ 0.33
CCDC38-203ENST00000546803 PPP2R2CQ9Y2T4 447 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 CAPN6Q9Y6Q1 641 aa17.1■□□□□ 0.33
CCDC38-203ENST00000546803 ATG2BQ96BY7 2078 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 MID1O15344 667 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 MAFKO60675 156 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 POP4O95707 220 aaKnown RBP17.09■□□□□ 0.33
CCDC38-203ENST00000546803 IGSF6O95976 241 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 BCKDHBP21953 392 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 CETN2P41208 172 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 GARSP41250 739 aaKnown RBP17.09■□□□□ 0.33
CCDC38-203ENST00000546803 MARCKSL1P49006 195 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 PEX5P50542 639 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 CCNHP51946 323 aaPredicted RBP17.09■□□□□ 0.33
CCDC38-203ENST00000546803 RHOAP61586 193 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 GBE1Q04446 702 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms