RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 APOL5Q9BWW9 433 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 C20orf27Q9GZN8 174 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 IQCGQ9H095 443 aaKnown RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 GLOD4Q9HC38 313 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 XAB2Q9HCS7 855 aaKnown RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 TXNDC16Q9P2K2 825 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 SLC24A2Q9UI40 661 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 PHTF1Q9UMS5 762 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 MTO1Q9Y2Z2 717 aaKnown RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 HCFC2Q9Y5Z7 792 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 TNRC18O15417 2968 aaPredicted RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 A0A0G2JND7 137 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 MATN3O15232 486 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 HOXA2O43364 376 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 MT-CO1P00395 513 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 POLBP06746 335 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 DNAJB1P25685 340 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 HARS2P49590 506 aaKnown RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 IL9RQ01113 521 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 ANKRD20A4Q4UJ75 823 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 MARC1Q5VT66 337 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 KCTD11Q693B1 232 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 PTAR1Q7Z6K3 402 aaPredicted RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 SLC39A11Q8N1S5 342 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 CARNMT1Q8N4J0 409 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 MCUQ8NE86 351 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 ZNF75CPQ92670 426 aaPredicted RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 CERS2Q96G23 380 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 SEMA3CQ99985 751 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 LBHD1Q9BQE6 289 aaPredicted RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 CORO1BQ9BR76 489 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 DHRS4Q9BTZ2 278 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 MOCS1Q9NZB8 636 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 UXTQ9UBK9 157 aaPredicted RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 TSR3Q9UJK0 312 aaKnown RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 DNMT3LQ9UJW3 386 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 CCL26Q9Y258 94 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 NUMBLQ9Y6R0 609 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 IQANK1A0A1B0GTG1 560 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 ZCWPW2A0A1B0GU75 182 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 ZNF487B1APH4 448 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 MYO1CO00159 1063 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 LYPLA1O75608 230 aaPredicted RBP12.15□□□□□ -0.46
CCDC38-202ENST00000546386 STC2O76061 302 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 CKMP06732 381 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 MYL4P12829 197 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 GABRR2P28476 465 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 WEE1P30291 646 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 MAGEA11P43364 429 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 HCAR3P49019 387 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 WNT3AP56704 352 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 RPL10AP62906 217 aaKnown RBP12.15□□□□□ -0.46
CCDC38-202ENST00000546386 NTHL1P78549 312 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 TRIP4Q15650 581 aaPredicted RBP12.15□□□□□ -0.46
CCDC38-202ENST00000546386 HECTD3Q5T447 861 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 PACS1Q6VY07 963 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 VSIG1Q86XK7 387 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 C7orf61Q8IZ16 206 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 ZNF683Q8IZ20 524 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 ATP6V0D2Q8N8Y2 350 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 BLOC1S5Q8TDH9 187 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 LRRC8CQ8TDW0 803 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 RPL10LQ96L21 214 aaKnown RBP12.15□□□□□ -0.46
CCDC38-202ENST00000546386 MRGPRX2Q96LB1 330 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 TM6SF2Q9BZW4 377 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 MRPL17Q9NRX2 175 aaKnown RBP12.15□□□□□ -0.46
CCDC38-202ENST00000546386 IGSF9Q9P2J2 1179 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 AGO1Q9UL18 857 aaKnown RBP12.15□□□□□ -0.46
CCDC38-202ENST00000546386 SLC39A10Q9ULF5 831 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 PCDHGC4Q9Y5F7 938 aa12.15□□□□□ -0.46
CCDC38-202ENST00000546386 F5H5T6 163 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 RTN3O95197 1032 aaPredicted RBP12.15□□□□□ -0.47
CCDC38-202ENST00000546386 CXCL14O95715 111 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 PEX11BO96011 259 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 SNRPAP09012 282 aaKnown RBP12.15□□□□□ -0.47
CCDC38-202ENST00000546386 HDCP19113 662 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 MZF1P28698 734 aaPredicted RBP12.15□□□□□ -0.47
CCDC38-202ENST00000546386 IRS1P35568 1242 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 CCR10P46092 362 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 ELAVL2Q12926 359 aaKnown RBP12.15□□□□□ -0.47
CCDC38-202ENST00000546386 TTC39BQ5VTQ0 682 aaPredicted RBP12.15□□□□□ -0.47
CCDC38-202ENST00000546386 FSTL4Q6MZW2 842 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 GAREM2Q75VX8 874 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 RFWD2Q8NHY2 731 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 DPF3Q92784 378 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 SGF29Q96ES7 293 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 PRR11Q96HE9 360 aaPredicted RBP12.15□□□□□ -0.47
CCDC38-202ENST00000546386 TOX2Q96NM4 488 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 TBL1YQ9BQ87 522 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 C17orf80Q9BSJ5 609 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 MUC3BQ9H195 1237 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 SPG21Q9NZD8 308 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 ARL5AQ9Y689 179 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 BRWD1Q9NSI6 2320 aa12.15□□□□□ -0.47
CCDC38-202ENST00000546386 FAM159BA6NKW6 160 aa12.14□□□□□ -0.47
CCDC38-202ENST00000546386 TRIM24O15164 1050 aa12.14□□□□□ -0.47
CCDC38-202ENST00000546386 KRT37O76014 449 aa12.14□□□□□ -0.47
CCDC38-202ENST00000546386 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
CCDC38-202ENST00000546386 PGAM1P18669 254 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms