RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ADPRHP54922 357 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 TPI1P60174 286 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 RACK1P63244 317 aaKnown RBP12.06□□□□□ -0.48
HDAC4-216ENST00000544989 PIGHQ14442 188 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-216ENST00000544989 PARP15Q460N3 678 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 RAB6CQ53S08 254 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 SLC45A4Q5BKX6 768 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 ARTNQ5T4W7 220 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 NCEH1Q6PIU2 408 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 ZSCAN30Q86W11 494 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 AADATQ8N5Z0 425 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 OR7D4Q8NG98 312 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 OR2A12Q8NGT7 310 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 C1orf216Q8TAB5 229 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 PIP4K2CQ8TBX8 421 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 CPLX3Q8WVH0 158 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 ARHGEF2Q92974 986 aaKnown RBP12.06□□□□□ -0.48
HDAC4-216ENST00000544989 BIRC7Q96CA5 298 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 LRIG1Q96JA1 1093 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 GTPBP2Q9BX10 602 aaKnown RBP12.06□□□□□ -0.48
HDAC4-216ENST00000544989 RAB6CQ9H0N0 254 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 PREBQ9HCU5 417 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 AP4E1Q9UPM8 1137 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 NBEAQ8NFP9 2946 aa12.06□□□□□ -0.48
HDAC4-216ENST00000544989 A0A1W2PPC4 97 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 FAM72CH0Y354 149 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-216ENST00000544989 PLRG1O43660 514 aaKnown RBP12.05□□□□□ -0.48
HDAC4-216ENST00000544989 DFNA5O60443 496 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 ZMPSTE24O75844 475 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 MT-CO1P00395 513 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 VAV1P15498 845 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 MAOBP27338 520 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 CASP14P31944 242 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 RAD51Q06609 339 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 GRIK2Q13002 908 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 SEMA3BQ13214 749 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 NFKBIBQ15653 356 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 ST3GAL2Q16842 350 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 UAP1L1Q3KQV9 507 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 BOLA3Q53S33 107 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 INO80DQ53TQ3 878 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-216ENST00000544989 FAM72AQ5TYM5 149 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 FAM72DQ6L9T8 149 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 NEK5Q6P3R8 708 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 ALKBH5Q6P6C2 394 aaKnown RBP12.05□□□□□ -0.48
HDAC4-216ENST00000544989 LINGO4Q6UY18 593 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-216ENST00000544989 ADAT2Q7Z6V5 191 aaKnown RBP12.05□□□□□ -0.48
HDAC4-216ENST00000544989 PRPF39Q86UA1 669 aaKnown RBP12.05□□□□□ -0.48
HDAC4-216ENST00000544989 FAM72BQ86X60 149 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 ZNF354CQ86Y25 554 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 UMODL1-AS1Q8N2C9 162 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 MINDY1Q8N5J2 469 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 OR8K1Q8NGG5 319 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 HEPHQ9BQS7 1158 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 ZWILCHQ9H900 591 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 SERGEFQ9UGK8 458 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 IL36AQ9UHA7 158 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 DNAI1Q9UI46 699 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 NEU3Q9UQ49 428 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 DMTF1Q9Y222 760 aa12.05□□□□□ -0.48
HDAC4-216ENST00000544989 NUMA1Q14980 2115 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3DA0A087WVF3 549 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3IA0A087WXS9 549 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3EA0A087X179 549 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3KA0A087X1G2 549 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3FA6NER0 549 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-216ENST00000544989 FAM47DPA6NHR8 397 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3LB9A6J9 549 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 EEF2KO00418 725 aaKnown RBP12.04□□□□□ -0.48
HDAC4-216ENST00000544989 KPNA3O00505 521 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-216ENST00000544989 DAPK3O43293 454 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 KDELR3O43731 214 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 BNIP3LO60238 219 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 MAGEC1O60732 1142 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 KCNK5O95279 499 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 GSRP00390 522 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 IGHV4-34P06331 123 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3HP0C7X1 549 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 DRD3P35462 400 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 HCAR3P49019 387 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 NUMBP49757 651 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 NDST2P52849 883 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 SNRPD1P62314 119 aaKnown RBP12.04□□□□□ -0.48
HDAC4-216ENST00000544989 ARF5P84085 180 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 OGDHQ02218 1023 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 CARD16Q5EG05 197 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3GQ6DHY5 549 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3CQ6IPX1 549 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TRIM69Q86WT6 500 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TBC1D3Q8IZP1 549 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-216ENST00000544989 PYROXD2Q8N2H3 581 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 LZTR1Q8N653 840 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 DNAJC7Q99615 494 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 OSBPL1AQ9BXW6 950 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 HDAC8Q9BY41 377 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 DEF6Q9H4E7 631 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 TM9SF3Q9HD45 589 aa12.04□□□□□ -0.48
HDAC4-216ENST00000544989 MYO1AQ9UBC5 1043 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms