RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 NUP93Q8N1F7 819 aa18.34■□□□□ 0.53
TNFAIP1-202ENST00000544907 AGAP2Q99490 1192 aa18.34■□□□□ 0.53
TNFAIP1-202ENST00000544907 SORT1Q99523 831 aa18.34■□□□□ 0.53
TNFAIP1-202ENST00000544907 TSEN34Q9BSV6 310 aaKnown RBP18.34■□□□□ 0.53
TNFAIP1-202ENST00000544907 SLC39A8Q9C0K1 460 aa18.34■□□□□ 0.53
TNFAIP1-202ENST00000544907 ARNT2Q9HBZ2 717 aa18.34■□□□□ 0.53
TNFAIP1-202ENST00000544907 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.34■□□□□ 0.53
TNFAIP1-202ENST00000544907 E9PAM4 449 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 F8W8V4 182 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 SPECC1L-ADORA2AF8WAN1 911 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 DFFAO00273 331 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 C2P06681 752 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 PAMP19021 973 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 KCNA4P22459 653 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 PSEN1P49768 467 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 TUBP50607 506 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 OLIG2Q13516 323 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 HNRNPDQ14103 355 aaKnown RBP18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 PPM1JQ5JR12 505 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 RABGAP1LQ5R372 815 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 METTL21CQ5VZV1 264 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 DENND5AQ6IQ26 1287 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 TRAF7Q6Q0C0 670 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 ZC3HC1Q86WB0 502 aaKnown RBP18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 PPHLN1Q8NEY8 458 aaKnown RBP18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 GABPB2Q8TAK5 448 aaPredicted RBP18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 HASPINQ8TF76 798 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 RSRC1Q96IZ7 334 aaKnown RBP18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 NUDCD1Q96RS6 583 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 UBE2OQ9C0C9 1292 aaKnown RBP18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 SIK2Q9H0K1 926 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 TRMT13Q9NUP7 481 aaKnown RBP18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 CLIC5Q9NZA1 410 aa18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 MYO18AQ92614 2054 aaKnown RBP18.33■□□□□ 0.52
TNFAIP1-202ENST00000544907 ITM2AO43736 263 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 CKBP12277 381 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 RHOQP17081 205 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 NMBRP28336 390 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 ACLYP53396 1101 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 SMARCB1Q12824 385 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 RANBP10Q6VN20 620 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 RINLQ6ZS11 566 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 ZCCHC23Q6ZST2 131 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 KIAA0408Q6ZU52 694 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 PRR11Q96HE9 360 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 ZNF778Q96MU6 729 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 RILPQ96NA2 401 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 RANBP9Q96S59 729 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 YY1AP1Q9H869 796 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 ZNF395Q9H8N7 513 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 NMRAL1Q9HBL8 299 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 VPS45Q9NRW7 570 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 OLA1Q9NTK5 396 aaKnown RBP18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 TCAF1Q9Y4C2 921 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 HS3ST4Q9Y661 456 aa18.32■□□□□ 0.52
TNFAIP1-202ENST00000544907 ZNF638Q14966 1978 aaKnown RBP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 C2orf71A6NGG8 1288 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 CCDC85CA6NKD9 419 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 OR6C75A6NL08 312 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 G3V2L1 256 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 TRIM13O60858 407 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 GM2AP17900 193 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 SLC39A12Q504Y0 691 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 KIAA0930Q6ICG6 404 aaPredicted RBP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 OTOP3Q7RTS5 596 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 CMC1Q7Z7K0 106 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 GALNT7Q86SF2 657 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 TREML1Q86YW5 311 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 ZNF683Q8IZ20 524 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 SLC43A3Q8NBI5 491 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 TSNARE1Q96NA8 513 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 OXCT2Q9BYC2 517 aaPredicted RBP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 SLC25A51Q9H1U9 297 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 RETREG1Q9H6L5 497 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 ELAC1Q9H777 363 aaKnown RBP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 NMUR1Q9HB89 426 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 PRDM5Q9NQX1 630 aaPredicted RBP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 IARS2Q9NSE4 1012 aaKnown RBP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 TLK1Q9UKI8 766 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 PCDHB5Q9Y5E4 795 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 IGLV3-10A0A075B6K4 115 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 A0A1W2PQH9 124 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 B2RBV5 119 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 ZNF195O14628 629 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 DDHD2O94830 711 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 PRDX6P30041 224 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 ARCN1P48444 511 aaKnown RBP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 RENBPP51606 427 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 IRX4P78413 519 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 SLC12A1Q13621 1099 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 MRPL58Q14197 206 aaKnown RBP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 CLLU1OSQ5K130 101 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 RTN4RL1Q86UN2 441 aaPredicted RBP18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 NSMCE1Q8WV22 266 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 GLT1D1Q96MS3 346 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 FAM167BQ9BTA0 163 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 SEZ6LQ9BYH1 1024 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 TREX1Q9NSU2 369 aa18.31■□□□□ 0.52
TNFAIP1-202ENST00000544907 TMEM248Q9NWD8 314 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms